Pongo abelii (Sumatran orangutan): 100172682 Help Entry 100172682         CDS       T01416                                  Symbol ATG16L1 Name (RefSeq) autophagy-related protein 16-1   KO K17890   autophagy-related protein 16-1 Organism pon  Pongo abelii (Sumatran orangutan) Pathway pon04136   Autophagy - other pon04140   Autophagy - animal pon04621   NOD-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:pon00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100172682 (ATG16L1)    04136 Autophagy - other     100172682 (ATG16L1)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     100172682 (ATG16L1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pon04131]     100172682 (ATG16L1)    03029 Mitochondrial biogenesis [BR:pon03029]     100172682 (ATG16L1) Membrane trafficking [BR:pon04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     100172682 (ATG16L1)  Others   Specific organelles associated proteins    Auto phagosome     100172682 (ATG16L1) Mitochondrial biogenesis [BR:pon03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     100172682 (ATG16L1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ATG16 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_like Motif Other DBs NCBI-GeneID:  100172682 NCBI-ProteinID:  NP_001125757 Ensembl:  ENSPPYG00000013289 UniProt:  Q5RAC9 LinkDB All DBs Position 11:136782238..136825801 Genome browser AA seq 607 aa AA seqDB search MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK HDVPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT HPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDSRLRHTLTGHSGKVLSAKFLLDN ARIVSGSHDRTLKHWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV VFSPDGSYVAAGSAEGSLYTWSVLTGKVEKVLSKQHSSSINAVAWSPSGLHVVSVDKGCK AVLWAQY NT seq 1824 nt NT seq  +upstreamnt  +downstreamnt atgtcgtcgggcctccgcgccgctgacttcccccgctggaagcgccacatctcggagcaa ctgaggcgccgggaccggctgcagagacaggcgttcgaggagatcatcctgcagtataac aaattgctggaaaagtcagatcttcattcagtgttggcccagaaactacaggctgaaaag catgacgtaccaaacaggcatgagataagtcctggacatgatggcacatggaatgacagt cagctacaagaaatggcccaactgaggattaagcaccaagaggaactgactgaattacac aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcggaag gacagggagatgcagatgaatgaagcaaaaattgcagaatgtttgcagactatctctgac ctggagacggagtgcctagacctgcgcactaagctttgtgaccttgaaagagccaaccag accctgaaggatgaatatgatgccctgcagatcacttttactgccttggagggaaaactg aggaaaactacggaagagaaccaggagctggtcaccagatggatggctgagaaagcccag gaagccaatcggcttaacgcagagaatgaaaaagactccaggaggcggcaagcccggctg cagaaagagcttgcagaagcagcaaaagaacctctaccagtcgaacaggatgatgacatt gaggtcatcgtggatgaaacctctgatcacacagaagagacctctcctgtgcgagccatc agcagagcagccactaagcgactctcacagcctgctggaggccttctggattctatcact aatatctttgggagacgctctgtctcttccttcccagtcccccaggacaatgtggatact catcctggttctggtaaagaagtgagggtaccaactactgccttgtgtgtgttcgatgca catgatggggaagtcaatgctgtgcagttcagtccaggttcccggttactggccaccgga ggcatggaccgcagggttaagctttgggaagtatttggagaaaaatgtgagttcaagggt tccctatctggcagtaatgcaggaattacaagcattgaatttgatagtgctggatcttac ctcttagcagcttcaaatgattttgcaagccgaatctggactgtggatgattctcggtta cggcacacactcacgggacacagtgggaaagtgctgtctgctaagttcctgctggacaat gcgcggattgtctcaggaagtcacgaccggactctcaaacactgggatctacgcagcaaa gtctgcataaagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaa tgtgtaatgagtggacattttgacaagaaaattcgtttctgggacattcgatcagagagc atagttcgagagatggagctgttgggaaagattactgccctggacttaaacccagaaagg actgagctcctgagctgctcccgtgatgacttgctaaaagttatcgatctccgaacaaat gctatcaagcagacgttcagtgcacctgggttcaagtgtggctctgactggaccagagtt gtcttcagccctgatggcagttacgtggcggcaggctctgctgagggctctctctatacc tggagtgtgctcacagggaaagtggaaaaggttctttcaaagcagcacagctcatccatc aatgcggtggcgtggtcgccctctggcttgcacgttgtcagtgtggacaaaggatgcaaa gctgtgctgtgggcacagtattga

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