Pongo abelii (Sumatran orangutan): 100172725
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Entry
100172725 CDS
T01416
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03022
Basal transcription factors
pon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100172725 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
100172725 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100172725 (ERCC3)
03400 DNA repair and recombination proteins [BR:
pon03400
]
100172725 (ERCC3)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100172725 (ERCC3)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100172725 (ERCC3)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100172725 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
100172725
NCBI-ProteinID:
NP_001125797
Ensembl:
ENSPPYG00000012769
UniProt:
Q5RA62
LinkDB
All DBs
Position
11:20598628..20637143
Genome browser
AA seq
782 aa
AA seq
DB search
MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAESVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG
KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagggaccgagcggaccgcgacaagaagaaatccaggaagcggcactatgag
gatgaagaggatgatgaagaggacgcccctgggaacgaccctcaggaagcggttccctcg
gcggcggggaagcaggtggatgagtccggcaccaaagtggatgaatatggagccaaggac
tacaggctgcagatgccgctgaaggacgaccacacctccaggcccctctgggtggctccc
gatggccatatcttcttggaagccttctctccagtttacaaatacgcccaagacttcttg
gtggctattgcagagtcagtgtgccgaccaacccatgtgcatgagtacaaactaactgcc
tactccttgtatgcagccgtcagcgttgggctgcaaaccagtgacatcaccgagtacctc
aggaagctcagcaagactggagtccctgatggaattatgcagtttattaagttgtgtact
gtcagctatggaaaagtcaagctggtcttgaagcacaacagatacttcgttgaaagttcc
caccctgatgtaatccagcatcttctccaggacccggtgatccgagaatgccgcttaaga
aactctgaaggggaggccactgagctcatcacagagactttcacaagcaaatctgccatt
tctaagactgctgaaagcagtggtgggccctccacttcccgagtgacagatccacagggt
aaatctgacatccctatggacctgtttgacttctatgagcaaatggacaaggatgaggaa
gaagaagaagagacacagacggtatcttttgaagtcaagcaggaaatgattgaggaactc
cagaaacgttgcatccacctggagtaccctctgttggcagaatacgacttccggaatgat
tctgtcaaccctgatatcaacattgatctaaagcccacagctgtcctcagaccctatcag
gagaagagcttgcgaaagatgtttggaaacgggcgtgcacgttcgggggtcattgttctt
ccctgcggtgcaggaaagtccctggttggtgtgactgctgcatgcactgtcagaaaacgc
tgtctggtgctgggcaactcagccgtttctgtggagcagtggaaagcccagttcaagatg
tggtccaccattgacgatagccagatctgccggttcacctctgatgccaaggacaagccc
atcggctgctccgttgccattagcacctactccatgctgggccacaccaccaaaaggtcc
tgggaggctgagcgagtcatggagtggctcaagacccaggagtggggcctcatgatcctg
gatgaagtgcacaccataccagccaagatgttccgaagggtgctcaccattgtgcaggcc
cactgtaagctgggtttgactgcgaccctcgtccgcgaagatgacaaaattgtggactta
aattttctgattgggcctaagctctacgaagccaactggatggagctgcagaataatggc
tacatcgccaaagtccagtgtgctgaggtctggtgccctatgtctcctgaattttaccgg
gaatatgtggcaatcaaaaccaagaaacgaatcttgctgtacaccatgaaccccaacaaa
tttagagcttgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaatgtgtttgccctgaaggaatatgccattcgactgaacaaaccctatatc
tacggacctacgtctcagggggaaaggatgcagattctccagaatttcaagcacaacccc
aaaattaacaccatcttcatatccaaggtaggtgacacttcgtttgatctgccagaagca
aatgtcctcattcagatctcatcccatggtggctccaggcgtcaggaagcccaaaggcta
gggcgggtgcttcgagctaaaaaagggatggttgcagaagagtacaatgcctttttctac
tcactggtatcccaggacacacaggaaatggcttactcaaccaagcggcagagattcttg
gtagatcaaggttatagcttcaaggtgatcacaaagctcgctggcatggaggaggaagac
ttggcgttttcgacaaaagaagagcagcagcagctcttacagaaagtcctggcagccact
gacctggatgccgaggaggaggtcgtggctggggaatttggctccagatccagccaggca
tctcggcgctttggcaccatgagctcgatgtctggggccgacgacaccgtgtacatggag
taccactcatcgcggagcaaggcgcccagcaaacatgtacacccgctctttaagcgcttt
aggaaatga
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