KEGG   Pongo abelii (Sumatran orangutan): 100172879
Entry
100172879         CDS       T01416                                 
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X3
  KO
K23380  FRAS1-related extracelluar matrix protein 1/2
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100172879 (FREM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:pon04091]
    100172879 (FREM1)
Lectins [BR:pon04091]
 C-Type lectins
  Lecticans
   100172879 (FREM1)
SSDB
Motif
Pfam: Cadherin_3 Frem_N Cadherin_4 Lectin_C Big_9 Calx-beta
Other DBs
NCBI-GeneID: 100172879
NCBI-ProteinID: XP_009242715
Ensembl: ENSPPYG00000019211
LinkDB
Position
13:43204734..43476692
AA seq 2179 aa
MNSLSWGAANALLLLLLLAWASPTFISINRGVRVMKGHSAFLSGDDLKFAIPKEKDACKV
EVVMNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDTVKLRLYRFTETDTFIET
FILWVYLLEPDCNIIRMSNNVLEVPEFNGLSQAIDKNLLRFDYDRMASLECTVSLDTART
RLPAHGQMVLGKPRPEEPRGDQPHSFFPESQLGAKLKCPGGSCTPGLKKIESLKVSCEEF
LLMGLRYQHLDPPSPNIDYISIQLDLTDTRSKIVYKSESAWLPVYIRAGIPNQIPKAAFM
AMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLLDHTRPISSFTW
KDLSDMQIAYQPPNSSHSERRHDEVELEVYDFFFERSAPMTVHISIRTADTNAPRVSWNT
GLNLLEGQSRAITWEQFQVVDNDDIGAVRLVTVGGLQHGWLTLRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINVLPKDDSPPFLITNVVIELEEGQTILI
QGSMLRASDVDASDDYIFFNITKPPQAGQIMKKPGPGVIGYPVPGFLQRDLFNGIIYYRH
FGGEIFEDSFQFVLWDSHEPPNLSVPQVATIHITPVDDQLPKEAPGVSRHLVVKETEVAY
ITKKQLHFIDSESYDRELVYTITTPPFFSFSHRHLDAGKLFMVDSIPKVVKNPTALELRS
FTQQAVNYMKVAYMPPMQDIGPHCRDVQFTFSVSNQHGSTLHGICFNITILPVDNQVPEV
FTNPLKVTEGGQSVISTEHILISDADTKLDNIDLSLRGLPLHGRVELNGFPLNSGGTFSW
GDLHTLKVRYQHDGSEVLQDDILLEVTDGTNSAEFVLHVEVFPVNDEPPVLKADLMPVMN
CSEGGEVVITSEYIFATDVDSDNLKLMFVIAREPQHGVVRRAGVTVDQFSQRDVISEAVT
YKHTGGEIGMMPCFDTITLVVSDGEAGPFVNVCCYNGPNPSVPLHASFPVYDLNITVYPV
DNQPPSIAIGPTFVVNEGCSRALTVNHLSATDPDTAADDLEFVLVSPPQFGYLENILPSV
GFEKSNIGISIDSFQWKDMNAFHINYVQSRHLRIEPTADQFTVYVTDGKQHSLEIPFSVI
INPTNDEAPDFVVQNITVCEGQMKELDSSIISAVDLDIPQDALLFSITQKPRHGLLIDRG
FSKDFSENKQPASPHQKHAPVHSFSMELLKTGMRLTYMHDDSESLADDFIIQLSDGKHKI
LKTISVEVTPVNDEKPMLSKKAEIAMNMGETRIISSAILSAIDEDSPREKIYYVFERLPQ
NGQLQLKIGRDWVPLSPGMKCTQEEVDLNLLRYSHTGAMDSQNQDSFTFYLWDGDNRSPA
LDCQITIKDMEKGDIVILTKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYG
QIEYVHYPGVPITSFSQMDIVGQTVCYVHKSKVTVSSDRFRFIISNGLRTEHGVFEITLE
TADRALPVVTRNKGLRLAQGAVGLLSPDLLQLTDPDTPAENLTFLLVQLPQHGQLYLWGT
GLLQHNFTQQDVDSRNVAYRHSGGDSQTDCFTFMATDSTNQGFIVNGRVWEKPVLFTIQV
DQLDKTAPRITLLHSPSQVGLLKNGCYGLYITSRVLKASDPDTEDDQIIFKILQGPKHGH
LENTTTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQIMDPTGNSATPQILELKW
SHIEWSQTEYEVCENVGVLPLEIIRRGYSMDSAFVGIKVNQVSATVGKDFTVTPSKLIQF
DPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYS
SNQSKHSTWEKGIWRLLPPGSSSSTTSGSFHLERRPLPSSMQLAVTRGDTLQGFDSTDLS
QRKLRTRGNGKTVRPSSVYRNGTDIIYNYHGIVSLKLEDDSFPTHKRKAKVSIISQPQKT
IKVAELPQADKVESTTDSHFPRQDQLPSFPKNCTLELKGLFHFEEGIQKLYQCNGIAWKA
WSPQTKDVEDKSCPAGWHQHSGYCHILITEQKGTWNAAAQACREQYLGNLVTVFSRQHMR
WLWDIGGRKSFWIGLNDQARAGHWEWIGGEPVAFTNGRRGPSQRSKLGKSCVLVQRQGKW
QTKDCRRAKPHNYVCSRKL
NT seq 6540 nt   +upstreamnt  +downstreamnt
atgaactctctgagttggggggctgcaaatgccctgttgctgctgctcctcctggcctgg
gccagccccaccttcatcagcatcaaccgtggggtgagggtgatgaaaggccactccgcc
ttcctgtcaggagatgacctgaaatttgccatccctaaagagaaagatgcctgcaaagtg
gaagttgtgatgaatgagccaataacccagagggttgggaaactcactccacaggtcttt
gactgccatttccttcccaatgaagtcaagtatgttcacaatggttgtccaattcttgat
gaagacacagtgaagctcagactttacagatttactgaaacagataccttcatagaaacc
tttatcctgtgggtctatcttctggaaccagactgtaacatcatccgtatgagtaacaat
gtgctggaggtgcctgaattcaatggcctgtcacaagcgattgataaaaatctgctcaga
tttgattatgataggatggctagcctggaatgtacggttagcttggacactgcgagaact
cggctgccagcccatggccagatggttctggggaagcctcgaccagaagaacctcgtgga
gatcagccacacagttttttcccagagtcccaactgggagcaaaactgaagtgtccaggt
ggaagctgtaccccaggattaaagaaaatagaaagccttaaagtgagctgtgaggagttc
ctgctgatgggccttcgttatcagcatctggatcccccttcacccaacattgattatatc
tccatccaactggacctcacagataccaggagtaaaattgtgtacaagtcagagagtgcg
tggctgcctgtctatatcagagctggaattccgaatcagattccaaaggctgcattcatg
gccatgtttattttggaagtggatcagttcatcctgacctccttgactacatcagttctg
gactgtgaagaagatgagacccctaaacccttgctggtgttcaacattactaaagccccg
ctccagggctatgtgactcacctgttggatcacaccagaccaatctcctcattcacctgg
aaagatctcagtgacatgcagatcgcctatcagccaccaaacagcagccattctgagagg
agacatgatgaggtagaattggaggtatacgacttcttctttgaaaggagtgcacctatg
acagtccacatctccatcagaacagcagatacaaatgccccccgtgtatcctggaataca
ggtctgaatctccttgaggggcagtctcgagccatcacttgggaacagtttcaggttgtc
gacaatgacgacattggtgctgtccggctagttactgttggtggcctgcagcatggatgg
ctgactttaagaggggggaaaggatttctcttcaccgtggctgacctccaggctggagtt
gttcgctatcatcatgatgacagcgactccaccaaagacttcgtggtcttccggatattt
gatggccatcacagcatccgtcacaaattccccatcaacgtcttgcccaaagatgatagt
cccccgttcctcataaccaatgttgtgattgaactggaggaggggcagaccattctgatc
cagggttccatgctgcgagcttcagatgtggacgccagtgatgactacatcttcttcaat
atcacaaagcctccacaggctgggcagatcatgaagaagccagggccaggagtgataggc
tatcctgtccctggcttccttcagagggatttgtttaatggaatcatttattatcgtcat
tttggtggagaaatctttgaagattcttttcaatttgtcctgtgggacagccatgaacct
ccaaatctttcagtgccacaggtggcaacaatccatataactccagtggatgaccagctt
ccaaaagaggctcctggagtttctcggcatttggttgtcaaggaaactgaggtggcctat
ataactaagaaacagctacattttatagattcagaatcatatgacagggagctggtctac
acaataactactcctccatttttctccttcagccacagacacttggatgctgggaaatta
tttatggtggacagcataccaaaagtagttaagaatcctacggccctggagctgaggtca
ttcactcagcaagctgtgaactatatgaaagtggcctacatgccccccatgcaagacatt
ggtccccattgcagagatgtccagttcacattttctgtcagtaaccaacatggcagcact
ttgcatgggatctgctttaacattacaatactcccagtggacaatcaagttcctgaggtg
ttcaccaaccctctgaaagtgactgagggaggtcaaagtgtcatcagcacagagcacatt
ctgatttctgatgcagataccaagctggacaatattgacctctccctgcggggactgcct
ctgcatggaagggtggagctgaatggatttcctctaaattcagggggcacattttcttgg
ggcgatctccataccttaaaagttaggtatcaacatgatggatctgaagttcttcaggat
gacatactcttggaggtcaccgatggcacaaattcagcagaatttgttctacatgttgag
gtattccctgtcaacgatgagccaccagtcttaaaggctgacctcatgcctgtcatgaac
tgctcagagggaggagaggtggtcatcacctctgaatacatttttgctactgatgtggac
agcgataacttgaagttgatgtttgtgattgctcgcgaacctcagcatggggtggtgagg
agagctggagtcacagtggatcagttctctcagagagatgttatctcagaggccgtgaca
tacaaacacacaggtggcgagattggcatgatgccttgttttgacaccattacattggtg
gtttcggatggagaggctggcccttttgtgaatgtctgttgctacaatggacccaatcca
tctgttccgcttcatgcgtcctttccagtgtatgatctcaacatcacggtatacccagta
gacaaccagccaccttccattgcaataggtcccacgtttgttgtaaatgagggctgctca
agagcccttactgttaaccatttgtccgccactgaccctgacactgcagcagatgacttg
gaatttgttttggtttctcctcctcagtttggctaccttgaaaatatactcccttctgtg
ggttttgaaaaaagcaatattggcataagtatagattcatttcagtggaaagacatgaac
gcttttcacattaactatgtgcagtccaggcatctgaggatagaaccaactgccgaccag
ttcacggtgtacgtcacagatgggaagcaacactccttggagataccattttctgttata
atcaaccccacaaatgatgaagctcctgactttgtagtgcagaatattactgtgtgtgag
ggtcagatgaaagagttggactcttccatcatcagcgctgtggacctggacattccccag
gatgccctgctgttcagcatcactcaaaagccacgccatggcctcctcatcgataggggg
tttagcaaagacttctctgagaataagcagccagccagccctcaccagaaacatgcacct
gttcacagcttttccatggaactcctcaagactggaatgaggttgacgtatatgcatgat
gactcagagagccttgctgatgattttataatccaattgtcagatgggaaacataagata
cttaaaaccatttcagtagaggtcaccccagttaatgatgaaaaaccaatgctgagcaag
aaggctgaaattgcaatgaatatgggtgaaactcgtattatttctagtgctattctttca
gccatagatgaagactcgcccagggagaagatttactatgtatttgaaaggcttccccaa
aatgggcaacttcagcttaagatagggagggactgggttcctctctcccctggcatgaaa
tgcactcaggaggaagtggatctgaacttgctgagatactcacacaccggggcaatggat
tcccagaatcaagatagcttcaccttctacctttgggatggcgacaacaggtcccctgct
cttgactgtcaaatcaccatcaaggacatggagaaaggtgatattgtcatccttacaaaa
ccactcgtggtgtctaaaggtgatagaggtttcttaacaaccaccactctcctggctgtg
gacggaacagacaagcctgaggaactgctctatgtcatcacctcccctccacgatatggc
cagatcgaatatgttcactatcctggagttcccattacaagcttcagccaaatggatata
gtggggcagacagtttgctatgtacacaagagcaaggtgactgtctccagtgacagattc
agattcatcatcagcaatggactgcggaccgagcatggggtgtttgagatcacactggag
actgcggacagagccctgcctgtggtaaccaggaacaaggggttgagactggcccaaggg
gctgtgggcctgctttcccctgacctccttcagctgaccgaccctgatacacctgcggag
aacctcaccttcctcttggttcagctcccccagcatggccagctctacctgtgggggaca
gggctacttcaacacaattttacccagcaggatgtggacagcaggaatgtggcctatcgg
cactcaggaggggactcccagactgactgctttactttcatggccacagacagcacaaac
caaggctttattgtgaatgggagagtgtgggaaaaacctgttttattcaccattcaggta
gaccaattggacaaaacagctcctcgtatcacactcttgcattccccttctcaagtgggg
ctcctgaaaaatggctgctacgggctttatatcacttcccgcgtgttgaaggcatcagac
cctgacactgaggatgatcagatcatctttaaaattctacaaggcccaaaacatggacat
ctggagaacacaacaacaggtgaatttatccatgagaaatttagccaaaaggacttgaac
agtaagactattctttacatcataaacccatccttggaagtaaattcagataccatggaa
tttcaaatcatggaccccacagggaactcggccactcctcaaattttggaactgaagtgg
tctcatattgaatggtcacagaccgaatatgaagtctgtgagaatgtgggtgtgttgccc
ttggaaattatcagaaggggatattccatggactcggcctttgtgggtataaaggtcaac
caagtgtcagctacagttggaaaagatttcaccgtgactccatctaaactgattcagttt
gacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaa
gatgatgaggtctttgaagtaattctgaactcccctgtgaatgcagttcttggcacaaag
acaaaagctgcagtgaaaattttggactcaaaaggaggacaatgccatccttcatattcc
tccaaccaaagcaagcacagcacatgggagaagggcatttggcgtctgctgcccccaggg
tcttcctcatccaccacttctggttcctttcatctggaaagaagacctcttccatcttcc
atgcagctagcagtcaccaggggagacaccctgcagggctttgattctacagatctttct
caaaggaagcttaggacccgtgggaatggcaaaacagtccgtccgtcctctgtttataga
aatggaacagacatcatctataattatcatgggatagtttccttgaaactggaggatgac
agtttcccaactcacaaaaggaaggccaaagtatccatcattagtcagccacaaaagaca
atcaaagtggcagaactgcctcaagcagataaggtggaatccacaactgactcacacttc
cccagacaggaccagttgccctcatttccaaagaactgcactctggaattaaagggactc
ttccattttgaagaaggcatccagaagctgtatcagtgcaatgggattgcctggaaagcc
tggagtccccaaaccaaggatgtggaagacaaatcctgtccagccgggtggcaccagcac
tcaggctactgtcacatcttgatcacagagcagaaaggcacctggaatgcggctgcccaa
gcttgcagggaacaatacctgggcaaccttgtaactgtattctccaggcagcacatgcgg
tggctctgggacattggtgggagaaagtccttttggataggtttgaatgaccaagcgcgt
gctggccactgggagtggatcggtggtgaacctgttgccttcaccaatgggagaagaggg
ccctctcaacgctccaagcttggaaagagctgtgttttggttcaaagacaagggaaatgg
caaacaaaagactgtaggagagccaaacctcataattatgtgtgttccagaaaactctaa

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