Pongo abelii (Sumatran orangutan): 100172915
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Entry
100172915 CDS
T01416
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100172915 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pon03009
]
100172915 (UTP4)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100172915 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_BBS7
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
CPSF_A
PQQ_2
Motif
Other DBs
NCBI-GeneID:
100172915
NCBI-ProteinID:
NP_001125977
Ensembl:
ENSPPYG00000007498
UniProt:
Q5R994
LinkDB
All DBs
Position
18:68626963..68675410
Genome browser
AA seq
686 aa
AA seq
DB search
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVGC
EDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHSSGTHIAAGSIDYISVFDVKSGSAVH
KMIVDRQYMGASKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKSHLIANADVQ
SIAVADQEDSFVVGTAEGTVFHFQLVPVTSNSNEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFAHHLELWRL
GSTVATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNY
EHDNISLKRVSKMPAFLRCALQILFSEDSTKLFVASNQGALHIVQLSGGSFKHLHAFQPQ
SGTVEAMCLLAVSPDGHWLAASGTSAGVHVYDVKQLKLHCTVPAYNFPVTAMAIAPNTNN
LVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTLLYNPFPPTNESDVVRRRTAHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcaggaatccgc
tgtgtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtct
cgggctacagaagctctgtgctgggcagaaggacaacgactctttagtgctgggctcaat
ggtgagattatggagtatgacttacaggcgttaaacatcaagtatgctatggatgccttt
ggaggacctatttggagcatggctgccagccccagtggctctcaacttttggttggctgt
gaagatggatctgtgaaactatttcaaattaccccggacaaaatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcagctggcattcctctggtacccacatt
gcagctggttccatagactacattagtgtgtttgatgtcaaatcaggcagcgctgttcat
aagatgattgtggacaggcagtatatgggcgcgtctaagcggaagtgcatcgtgtggggt
gtcgccttcttgtccgatggcactgtcataagtgtggactctgctgggaaggtgcagttc
tgggactcagccactgggacgcttgtgaagagccatctcatcgctaatgctgatgtgcag
tccattgctgtagctgaccaagaagacagtttcgtggtgggcacagccgagggaacagtc
ttccattttcagctggtccctgtgacatctaacagcaacgagaagcagtgggtgcggaca
aaaccgttccagcatcacactcatgacgtgcgcaccgtggcccacagcccaacagcgctg
atatctggaggcactgacacccacttagtcattcgtcctctcatggagaaggtggaggta
aagaattacgatgccgctctccgaaaaatcacctttccccaccgatgtctcatttcctgt
tctaaaaagaggcagcttctcctcttccagtttgctcatcacttagaactctggcgactg
ggatccacagttgcaactggcaagaatggggatactcttccactctctaaaaatgcagat
catttactgcacctaaagacaaagggtcctgagaacattatctgtagctgtatctcccca
tgtggaagttggatagcctattctacagtttctcggttttttctctatcggctgaattat
gaacatgacaacataagcctcaaaagggtttccaaaatgccagcattccttcgctgtgcc
cttcagattttgttttctgaagattcaacaaagctctttgtagcatcaaatcaaggagct
ctgcatattgttcagctgtcaggaggaagcttcaagcacctgcatgctttccagcctcag
tcaggaacagtggaggccatgtgtcttttggcagtcagtccagatgggcattggctagct
gcatcaggtaccagtgctggagtccatgtctacgatgtaaaacagctaaagcttcactgc
acggtgcctgcttacaatttcccagtgactgctatggccattgcacccaataccaacaac
cttgtcatcgctcattcggaccagcaggtatttgagtacagcatcccagacaaacagtat
acagattggagccggactgtccagaagcagggctttcatcacctttggctccaaagggat
actcctatcacacacatcagttttcatcccaagagaccgatgcacatccttctccatgat
gcctacatgttctgcatcattgacaagtcattgccccttccaaatgacaaaaccttactc
tacaatccatttcctcccacgaatgaatcagatgtcgtccggaggcgcacagctcatgct
tttaaaatttctaagatatataagcctctactcttcatggatcttttggatgaaagaaca
cttgtggcagtagaacggcctctggatgacatcattgctcaactcccaccacccattaaa
aagaagaaatttggaacctaa
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