Pongo abelii (Sumatran orangutan): 100173138
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Entry
100173138 CDS
T01416
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03022
Basal transcription factors
pon05017
Spinocerebellar ataxia
pon05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100173138 (GTF2B)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100173138 (GTF2B)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100173138 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100173138 (GTF2B)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100173138 (GTF2B)
Prokaryotic type
Archaeal type
TFB
100173138 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
100173138
NCBI-ProteinID:
NP_001126175
Ensembl:
ENSPPYG00000001178
UniProt:
Q5R886
A0A2J8SKU9
LinkDB
All DBs
Position
1:144045503..144083891
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AA seq
316 aa
AA seq
DB search
MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PTDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccagccgtttggatgctcttccaagagtcacatgtccaaaccatccagat
gcgattttagtggaggactacagagccggtgatatgatctgtcctgaatgtggcttggtt
gtaggtgaccgggttatcgatgtgggatctgaatggcgaactttcagcaatgacaaagca
acaaaagatccatctcgagttggtgattctcagaatcctcttctgagtgacggagatttg
tctaccatgattggcaagggcacaggagctgcaagttttgatgagtttggcaattctaag
taccagaatcggagaacaatgagcagttctgatcgggcaatgatgaatgcattcaaagaa
atcactaccatggcagacagaatcaatctacctcgaaatatagttgatcgaacgaataat
ttattcaagcaagtatatgaacagaagagcctgaagggaagagctaatgatgctatagct
tctgcttgtctctatattgcctgtagacaagaaggggttcctaggacatttaaagaaata
tgtgccgtatcacgaatttctaagaaagaaattggtcggtgttttaaacttattttgaaa
gcgctagaaaccagtgtggatttgattacaactggggacttcatgtccaggttctgttcc
aacctttgtcttcctaaacaagtgcagatggcagctacacatatagcccgtaaagctgtg
gaactggacttggttcccgggaggagccccatctctgtggcagcggcagctatttacatg
gcctcacaggcatcagctgaaaagaggacccaaaaagaaattggagatattgctggtgtt
gctgatgttacaatcaggcagtcctatagacttatctatcctcgagccccagatctgttt
cctacagacttcaaatttgacaccccagtggacaaactaccacagctataa
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