Pongo abelii (Sumatran orangutan): 100173168
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Entry
100173168 CDS
T01416
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 precursor
KO
K06527
vascular cell adhesion molecule 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04064
NF-kappa B signaling pathway
pon04514
Cell adhesion molecules
pon04668
TNF signaling pathway
pon04670
Leukocyte transendothelial migration
pon04933
AGE-RAGE signaling pathway in diabetic complications
pon05143
African trypanosomiasis
pon05144
Malaria
pon05417
Lipid and atherosclerosis
pon05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100173168 (VCAM1)
04668 TNF signaling pathway
100173168 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100173168 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100173168 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100173168 (VCAM1)
05143 African trypanosomiasis
100173168 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100173168 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100173168 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100173168 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pon04515
]
100173168 (VCAM1)
04090 CD molecules [BR:
pon04090
]
100173168 (VCAM1)
04091 Lectins [BR:
pon04091
]
100173168 (VCAM1)
Cell adhesion molecules [BR:
pon04515
]
Immunoglobulin superfamily
VCAM
100173168 (VCAM1)
CD molecules [BR:
pon04090
]
Proteins
100173168 (VCAM1)
Lectins [BR:
pon04091
]
I-type lectins (Siglecs)
100173168 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set
ig
Ig_2
V-set
C2-set_2
ICAM_N
ICAM1_3_5_D2
Ig_5
Ig_6
Ig_4
Adhes-Ig_like
PASTA
INCA1
Motif
Other DBs
NCBI-GeneID:
100173168
NCBI-ProteinID:
NP_001126200
Ensembl:
ENSPPYG00000001112
UniProt:
Q5R847
LinkDB
All DBs
Position
1:complement(132150254..132169225)
Genome browser
AA seq
739 aa
AA seq
DB search
MPGKMIVIFGASNILWIMFAASQAFKIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWR
TQIDSPLNGKVTNEGTASTLTMNPVSFGNEHSYLCTATCKSRKLEKGIQVEIYSFPKDPE
IHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEV
TFTPVIEDIGKVLVCRAKLRIDEMDSVPTERQAVKELQVYISPKNTVISVNPSTKLQEGS
SVTMTCSSEGLPPPEIFWSKKLDNGNLQHLSGNATLTLIAMRMEDSGIYVCEGVNLVGKN
RKEVELIVQEKPFIVEISPGPRIAARIGDSVMLTCSVIGCESPSFSWRTQVDSPLSGKVR
SEGTNSTLTLSPVSFENEHSYLCTVTCGHKKLEKGIQVELYSFPRDPEIEMSGDLVNGSS
VTVSCKVPSVYPLDRLKIELLKGETILKNIEFLEDTDMKSLENKSLEMTFIPTIEDTGKA
LVCQAKLHIDDMEFEPKQRQSTQTLYVNVAPRDTTVLVSPSSILEEGSSVNMTCLSQGFP
APKILWSRQLPNGELQPLSENATLTLISTKMEDSGVYLCEGINQAGRSRKEVELIIQVTP
KDIKLTAFPSESVKEGDTVIISYTCGNVPETWIILKKKAETGDTVLKSIDGAYTIRKAQL
KDAGVYECESKNKVGSQLRSLTFDVQGRENNKDYFSPELLVLYFASSLIIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatgatcgtgatctttggagcctcaaatatactttggataatgtttgca
gcttctcaagcttttaaaatcgagaccaccccagaatctaggtatcttgctcagattggt
gactccgtctcattgacttgcagcaccacaggctgtgagtccccatttttctcttggaga
acccagatagatagtccactgaatgggaaggtgacgaatgaggggaccgcgtctacgctg
acaatgaatcctgttagttttgggaacgaacactcttacctgtgcacagcaacttgtaaa
tctaggaaattggaaaaaggaatccaggtggagatctactcttttcctaaggatccagag
attcatttgagtggccctctggaggctgggaagccgatcacagtcaagtgttcggttgct
gatgtatacccatttgacaggctggagatagacttactgaaaggagatcatctcatgaag
agtcaggaatttctggaggatgcagacaggaagtccctggaaaccaagagtttggaagta
acctttactcctgtcattgaggatattggaaaagttcttgtttgccgagctaaattacgt
attgatgaaatggattctgtgcccacagaaaggcaggctgtaaaagaattgcaagtctac
atatcacccaagaatacagttatttctgtgaatccatccacaaagttgcaagaaggtagc
tctgtgaccatgacttgttccagtgagggtctaccacctccagagattttctggagtaag
aaattagataatgggaatctacagcacctttctgggaatgcaactctcaccttaattgct
atgaggatggaagattctggaatttatgtgtgtgaaggagttaatttggttgggaaaaac
agaaaagaggtggaattaattgttcaagagaaaccatttattgttgagatctcccctgga
ccccggattgctgctcggattggggactcagtcatgttgacatgtagtgtcataggctgt
gagtccccatcattctcctggagaacccaggtagacagccctctgagcgggaaggtgagg
agtgaggggaccaattccacgctgaccctgagccctgtgagttttgagaacgaacactct
tatctgtgcacagtgacttgtggacataagaaactggaaaagggaatccaggtggagctc
tactcattccctagagatccagaaatcgagatgagtggtgacctcgtgaatgggagctct
gtcactgtaagctgcaaggttcctagtgtgtacccccttgaccggttgaagattgaatta
cttaagggggagactattctgaagaatatagagtttttggaggatacggatatgaaatct
ctagagaacaaaagtttggaaatgaccttcatccctactattgaagatactggaaaagct
cttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaaggcag
agtacacaaacactttatgtcaatgttgcccccagagatacaaccgtcttggtcagccct
tcctccatcctggaggaaggcagttctgtgaatatgacatgcttgagccaaggctttcct
gctccgaaaatcctgtggagcaggcagctccctaacggggagctacaacctctttctgag
aacgcaactctcaccttaatttctacaaaaatggaagattctggggtttatttatgtgaa
ggaattaaccaggctggaagaagcagaaaggaagtagaattaattatccaagttactcca
aaagacataaaacttacagcttttccttctgagagtgtcaaagaaggagacactgtcatc
atctcttatacatgtggaaatgttccagaaacatggataatcctgaagaaaaaagcagag
acaggagacacagtactaaaatctatagatggcgcctataccatccgaaaggcccagttg
aaggatgcgggagtatatgaatgtgaatctaaaaacaaagttggctcacaattaagaagt
ttaacatttgatgttcaaggaagagaaaacaacaaagactatttttctcctgagcttctc
gtgctctattttgcatcctccttaataatacctgccattggaatgataatttactttgca
agaaaagccaacatgaagggttcatatagtcttgtagaagcacagaaatcaaaagtgtag
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