Pongo abelii (Sumatran orangutan): 100173254
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Entry
100173254 CDS
T01416
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100173254 (DDX18)
03009 Ribosome biogenesis [BR:
pon03009
]
100173254 (DDX18)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100173254 (DDX18)
Spliceosome [BR:
pon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100173254 (DDX18)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
Helicases
100173254 (DDX18)
Pre-60S particles
100173254 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
100173254
NCBI-ProteinID:
NP_001126280
Ensembl:
ENSPPYG00000012796
UniProt:
Q5R7S3
LinkDB
All DBs
Position
11:complement(30344333..30362085)
Genome browser
AA seq
670 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASNLTLSETQNGDVSEETMGSRKVKKSKQKP
MNVSLSETQNGDMPQEAVENIKVKKSPQKSTVLTNGEAAMQSPNSESKKKKKKKRKMVND
AEPDTKKAKTENKGQPEEESAETPKETENNVEKPDNDEDESEVPSLPLGLTGAFEDTSFA
SLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVEL
IVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLAN
GINIIVATPGRLLDDMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQT
MLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFL
KKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLL
CTGVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRY
LKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFN
VNNLNLPQVALSFGFKVPPFVDLNINSNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHISK
KSSDSRQFSH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctgccgatgaaactcctgcgtaagaagatcgagaagcggaacctcaaattg
cggcagcggaacctaaagttgcagggggcctcaaatctgaccctatcagaaactcaaaat
ggagatgtatctgaagaaacaatgggaagtagaaaggttaaaaaatcaaaacaaaagccc
atgaatgtgagcttatcagaaactcaaaatggagacatgcctcaagaagcagtagaaaat
ataaaagttaaaaaatctccccagaaatccactgtattaaccaatggagaagcagcaatg
cagtctcccaattcagaatcaaaaaagaaaaagaagaaaaagagaaaaatggtgaatgat
gctgagcctgatacaaaaaaagcaaaaactgaaaacaaagggcaacctgaagaagaaagt
gccgagactcctaaagaaacagagaataatgtggagaagccagataatgatgaagatgag
agtgaggtgcccagtctgcccctgggactgacaggagcttttgaggatacttcgtttgct
tctctatgtaatcttgtcaatgaaaacaccctgaaggcaataaaagaaatgggttttaca
aacatgactgaaattcagcataaaagtatcagaccacttctggaaggcagggatcttcta
gcagctgcaaaaacaggcagtggtaaaaccctggcttttctcatccctgcggttgaactc
attgttaagctaaggttcatgcccaggaatggaacaggagtccttattctctcacctact
agagaactagccatgcaaacttttggtgttcttaaggagctaatgactcaccacgtgcat
acctatggcttgataatgggtggcagtaacagatctgctgaagcacagaaacttgctaat
gggatcaacatcattgtggccacaccaggccgtctgctggacgatatgcagaatacccca
ggatttatgtataaaaacctgcagtgtctggttattgatgaagctgatcgtatcttggat
gtggggtttgaagaggaattaaagcaaattattaaacttttgccaacacgtagacagact
atgctcttttctgccacccaaactcgaaaagttgaagacctggcaaggatttctctgaaa
aaggagccattgtatgttggtgtcgatgatgataaagctaatgcaacagtggatggtctt
gagcagggatatgttgtttgtccttctgaaaagagattccttctgctctttacattcctt
aagaagaaccgaaagaagaagcttatggtcttcttttcatcttgtatgtctgtgaaatac
cactatgagttgctgaactacattgatttgcccgtcttggccattcatggaaagcaaaag
caaaataagcgtacaaccacattcttccagttctgcaatgcagattcgggaacactgttg
tgtacaggtgtggcagcaagaggactggacattcctgaagtcgactggattgttcagtat
gaccctccggatgaccctaaggaatatattcatcgtgtgggtagaacagccagaggccta
aatggaagagggcatgccttgctcattttgcgcccagaagaattgggttttcttcgctac
ttgaaacaatccaaggttccattaagtgaatttgacttttcctggtctaaaatttctgac
attcagtctcagcttgagaaattgattgaaaagaattactttcttcataagtcagcccag
gaagcatataagtcatacatacgagcctatgattcccattctctgaaacagatctttaat
gttaataacttaaatttgcctcaagttgctctgtcatttggcttcaaggtgcctcccttc
gttgatctgaacatcaacagcaatgaaggcaagcagaaaaagcgaggaggtggtggtgga
tttggctaccagaaaaccaagaaagttgagaagtccaaaatctttaaacacattagcaag
aaatcatccgacagcaggcagttctctcactga
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