Pongo abelii (Sumatran orangutan): 100173266
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Entry
100173266 CDS
T01416
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03030
DNA replication
pon03420
Nucleotide excision repair
pon03430
Mismatch repair
pon03440
Homologous recombination
pon03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100173266 (RPA1)
03420 Nucleotide excision repair
100173266 (RPA1)
03430 Mismatch repair
100173266 (RPA1)
03440 Homologous recombination
100173266 (RPA1)
03460 Fanconi anemia pathway
100173266 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100173266 (RPA1)
03032 DNA replication proteins [BR:
pon03032
]
100173266 (RPA1)
03400 DNA repair and recombination proteins [BR:
pon03400
]
100173266 (RPA1)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100173266 (RPA1)
DNA replication proteins [BR:
pon03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100173266 (RPA1)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100173266 (RPA1)
MMR (mismatch excision repair)
100173266 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100173266 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
IBR
DUF8512
Motif
Other DBs
NCBI-GeneID:
100173266
NCBI-ProteinID:
NP_001126290
Ensembl:
ENSPPYG00000036571
UniProt:
Q5R7Q4
LinkDB
All DBs
Position
19:1629314..1697491
Genome browser
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMSAT
QLNPLVEQEQLSSNCVCQINRFIVNTLKDGRRVVILMELEVLKSAEVVGVKIGNPVPYNE
GLGQPQVAPPAPAASPAASSRPQPQNGTSGAGSTVSKAYGASKTFGKAAGPSLSHNSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEEKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQF
DFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGGVGGGNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYR
EYGRRLVMSIRRSALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagcgagggggccattgcggccatcatgcagaagggggatacaaac
ataaagcccatcctccaagtcatcaacatccgtcccattactacggggaatagtccgccg
cgttatcgactgctcatgagtgatggattgaacactctatcctctttcatgtcggcaaca
cagttgaaccctcttgtggagcaagaacaattgtccagcaactgtgtttgccagattaac
agatttattgtgaacactctgaaagatggaaggagagtagttatcttgatggaattggaa
gttttgaagtcagctgaagtagttggagtgaagattggcaatccagtgccctataatgaa
ggactcgggcagccgcaagtagctcctccagcgcccgcagccagtccagcagcaagcagc
aggccccagccgcagaatggaacctcgggagcgggttccactgtttctaaggcttatggt
gcttcaaagacatttggaaaagctgcaggtcccagcctgtcacacaattctgggggaaca
cagtccaaagtggtgcccattgccagcctcactccttaccagtccaagtggaccatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagagaag
cttttctctctagaactggttgatgaaagtggtgaaatcagagctacagctttcaatgag
caagtggacaagttctttcctcttattgaagtgaacaaggtgtattatttctcaaaaggc
accctgaagattgctaacaagcagttcacagctgttaaaaatgactacgagatgaccttc
aataatgagacttccgtcatgccctgtgaggacgaccatcatttacctacggttcagttt
gatttcacggggattgatgacctcgagaacaagtcgaaagactcacttgtagacatcatc
gggatctgcaagagctatgaagatgccactaaaatcacagtgaggtctaacaacagagaa
gttgccaagaggaatatctacttgatggacacatctgggaaggtggtgactgctacgcta
tggggggaagatgctgataaatttgatggttctagacagcccgtgttggctatcaaagga
gcccgagtctctgatttcggtggacggagcctctccgtgctgtcttcaagcactatcatt
gcaaatcctgacatcccagaggcctataagcttcgtggatggtttgacgcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagcggcggagtcggagggggtaacacc
aactggaaaaccttgtatgaggtcaaatccgagaacctgggccaaggcgacaagccggac
tactttagttctgtggccacagtggtgtatcttcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgatcgatcaacagaatggattgtaccgctgt
gagaagtgcgacaccgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacaaaatgctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtggagacc
tacaatgacgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gagtatggccgaaggctggtcatgagtatcaggagaagcgcattgatgtga
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