Pongo abelii (Sumatran orangutan): 100173334
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Entry
100173334 CDS
T01416
Symbol
PCDHB4
Name
(RefSeq) protocadherin beta-4 precursor
KO
K16494
protocadherin beta
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pon04515
]
100173334 (PCDHB4)
Cell adhesion molecules [BR:
pon04515
]
Cadherins
Protocadherins
100173334 (PCDHB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100173334
NCBI-ProteinID:
NP_001126353
UniProt:
Q5R7F1
LinkDB
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Position
4:149484981..149488776
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AA seq
795 aa
AA seq
DB search
MKKLGRIHPNRQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLEIGELAS
RSARVLSDDDKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGEL
LIQDINDHSPVFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHIL
TRNHSEGKKYPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPE
FVHTPYGVQVLENSPLDSPIVRVLARDVDAGNFGSVSYGLFQASDEIKQTFSISEVTGEI
LLKKKLDFEKIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIMSSLTSSIPENAP
ETVVSVFRIRDRDSGENGKMICSIPDSLPFILKPTLKNFYTLVTERPLDRETSAEYNITI
TVTDLGTPRLRTQQSITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVRATDRDSG
TNAQVTYSLLPPQDPNLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPAL
SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW
LSYQLLKTTEPGLFSVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATAMLHVL
LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS
VGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQNTGR
EVKENPNFRNSLVFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctagggagaattcatccaaacaggcaagtgttggcctttattttgatggtg
ttcttgtctcaggttcgcctcgagcctattcgttattctgtgttggaggaaacagagagc
ggctcctttgtagcccatctggccaaggatctgggcctggaaattggggaactggcctcc
cggtcagcccgggtgctgtctgacgatgacaagcagcgtttgcagctggatcgtcagact
ggagatttgcttctgagggagaaactagaccgggaagagctctgtggtcctattgaaccg
tgtgtactgcatttccaagtgttcctggaaatgccggtgcaattttttcaaggagaatta
ttgatccaggacataaatgatcactctccagtattccctgaaagggaagtgctcttgaaa
atactagaaaatagccagccggggactctatttccgttgctaatagctgaggatttggat
gtgggcagcaatggtcttcaaaaatacacaatcagccccaattctcattttcacattctc
actcgaaatcatagtgagggcaagaaatacccagatttggtgcaggacaaaccactggat
cgagaggagcagcctgagttcagcttaaccctcgtggcgctggatggtgggtctccacct
aggtctggcacggtcatggttcgaatcctgatcatggacatcaatgacaatgctcctgag
tttgtgcacactccatatggggtgcaggtcctggaaaacagccccctagactctccaatt
gttagggtcttagctagagatgtagatgctggaaacttcgggagtgtttcttatggctta
ttccaagcatcagatgaaattaagcaaactttctcaataagtgaagtcacgggagaaata
ctactgaaaaaaaaattggatttcgaaaaaattaaatcttaccatgtagaaattgaggcc
acagatggaggaggcctttctgggaaaggcactgtagtcatagaggtggtggatgtgaat
gacaatcccccagaacttatcatgtcttcactcaccagctccatcccagaaaatgctcct
gagacagtagtctctgtcttccgaattcgagatagagattccggagaaaatggaaagatg
atttgctctattccagatagtctaccgtttattctaaaaccaactttgaagaatttttac
accctggtaacagagagaccactggacagagagaccagcgccgagtacaacatcaccatc
accgtcactgatttggggacacccaggctgagaacccagcagagcataaccgtgcaggtc
tccgacgtcaatgacaatgcccccgccttcacccaaacgtcctacaccctgttcgtccgc
gagaacaacagccccgccctgcacatcggcagtgtcagggccacagacagagattccggc
accaacgcccaggtcacctactcgctgctgccgccccaggacccgaacctgcccctcgcc
tccctagtctccatcaacgcagacaacggccacctgttcgccctcaggtcgctggactac
gaggccctgcaggcgttcgagttccgcgtgggcgcctcagaccgcggttccccggcgctg
agcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttcgtg
ctgtacccgctgcagaacggctccgcgccttgcaccgagctggtgccccgggcggccgag
ccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaagaccacggagcccgggctgttcagtgtgtgggcgcacaat
ggcgaggtgcgcaccgccaggctgctgagcgagcgcgatgcggccaagcacaggctggtg
gtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccatgctgcacgtgctc
ctggtggatggcttctcccagccctacctgcctctcccggaggcggccccagcccaggcc
caggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcactcttc
ctcttttcggtgctcctgttcgtggcggtgcggttgtgcaggaggagcagggcggcctca
gtgggtcgctgctcggtgcccgagggcccctttccagggcatctggtggacgtgagcggc
accgggaccctatcccagagctaccagtacgaggtgtgtctgacaggagactctgggact
ggtgagttcaagttcctgaagccaatatttcctaacctcttggttcagaacaccgggagg
gaagttaaggaaaaccccaacttcagaaatagcttggtattcagttaa
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