Pongo abelii (Sumatran orangutan): 100173345
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Entry
100173345 CDS
T01416
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100173345 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pon04147
]
100173345 (COPA)
Membrane trafficking [BR:
pon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100173345 (COPA)
Exosome [BR:
pon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100173345 (COPA)
Exosomal proteins of bladder cancer cells
100173345 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
100173345
NCBI-ProteinID:
NP_001126364
Ensembl:
ENSPPYG00000000634
UniProt:
Q5R7D6
LinkDB
All DBs
Position
1:90215651..90269388
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AA seq
928 aa
AA seq
DB search
MGSSSYGTIGCALSLTSMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQ
LRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGL
TAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFD
VQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWD
ESGVFIYTTSNHIKCAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTE
FKFKLALTNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECG
NIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKL
RKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKE
TFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADID
IDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDISP
GAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYK
QLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQL
TTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKE
TLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPE
VAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEF
KGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatccagttatgggactatcggatgtgcactctcattgacaagtatgattgtg
tttaagctggaacgggaacggccagcctatgctgttcatggcaatatgctacactatgtc
aaggaccgattcttacgacagctggatttcaacagctccaaagatgtagctgtgatgcag
ttgcggagtggttccaagtttccagtattcaatatgtcatacaatccagcagaaaatgca
gtcctgctttgtacgagagctagcaatttagagaatagtacctatgacctgtacaccatc
cctaaagatgctgactcccagaatcctgatgcgcctgaagggaaacgatcctcaggcctg
acagctgtttgggtcgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctg
atcaagaatctgaagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatc
ttctatgctggcacaggcaatctcctgcttcgagatgcggactctatcacactctttgac
gtacagcagaagcggactctggcatctgtgaagatttctaaagtgaaatacgttatctgg
tcagcagacatgtcacatgtagcactactagccaaacacgccattgtgatctgtaaccgc
aaactggatgctttatgtaacattcatgagaacatccgcgtcaagagtggggcctgggat
gagagtggggtatttatctataccacaagcaaccacatcaaatgtgctgtcaccactggg
gaccacgggatcattcgaactctggatttacccatctatgtcacacgggtgaaaggcaac
aatgtatactgcctagacagggagtgtcgtccccgggtactcaccattgatcccactgag
ttcaaattcaagctggccctgaccaacagaaaatatgatgaggtactgcacatggtgagg
aatgctaaactagttggccagtctattattgcttatctccagaagaagggctatcctgaa
gtggcactgcattttgtcaaggatgagaaaactcgctttagtctggcactggagtgtgga
aacattgagattgctctggaagcagccaaagcattggatgacaagaactgctgggaaaag
ctgggagaagtggccctgctgcaggggaaccaccagattgtggaaatgtgctatcagcgt
accaaaaactttgacaaactttccttcctgtatcttatcactggcaacttagaaaaactt
cgcaagatgatgaagattgctgagatcagaaaggacatgagtggccattatcagaatgcc
ctatacctgggtgatgtgtcagagcgtgtgcggatcctgaagaactgtggacagaaatcc
ctggcctatctcacagctgctacccatggcttagatgaagaagctgagagcctaaaggag
acattcgacccagagaaggagactatcccagacattgaccctaatgccaagctgctccag
ccacctgcacctatcatgcccttggataccaattggcctttattgactgtatccaaagga
ttttttgaaggcaccattgccagcaaagggaagggaggagcactggccgctgacattgac
attgacaccgttggtacagagggctggggagaggatgcagagctgcagttggatgaagat
gggtttgtggaggctacagaaggtttgggggatgatgctcttggcaagggacaggaagaa
ggaggtggctgggatgtagaagaagatctggagctccctcctgagctggatatatcccct
ggggcagctggtggggctgaagatggtttctttgtgcccccaaccaagggaacaagtcca
actcagatctggtgtaataactctcagcttccagttgatcacatcctggcaggctctttt
gaaacagccatgcggctccttcatgaccaagtaggggtaatccagtttggcccctacaag
caactgttcctacagacatacgcccgaggccgcacaacctatcaggctctgccctgccta
ccctccatgtatggctatcctaatcgcaactggaaggatgcagggctgaagaatggtgta
ccagctgtgggcctgaagcttaatgacctcatccaacggttgcagctgtgctaccagctc
accacagttggcaaatttgaggaggctgtggaaaaattccgttccatccttctcagtgtg
ccacttcttgttgtggacaataaacaagagattgcagaggcccagcagctcattaccatt
tgccgtgagtacattgtgggtttgtccatggagatagaaaggaagaagctgcccaaagag
actctagaacagcagaagcgcatctgtgagatggcagcctattttacccactcaaacctg
cagcctgtgcacatgatcctggtgctgcgtacagccctcaatctcttcttcaagctcaag
aacttcaagacagctgccacctttgctcggcgcctactagaactcgggcccaagcctgag
gtggcccaacagacccgaaaaatcctgtctgcctgtgagaagaatcccacagatgcctac
cagctcaattatgacatgcacaacccctttgacatctgtgctgcatcatatcggcccatc
taccgtggaaagccagtagaaaagtgtccactcagtggggcctgctattcccctgagttc
aaaggtcaaatctgcagggtcaccacagtgacagagattggcaaagatgtgattggttta
aggatcagtcctctgcagtttcgctaa
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