Pongo abelii (Sumatran orangutan): 100173398
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Entry
100173398 CDS
T01416
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100173398 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100173398 (USP39)
Spliceosome [BR:
pon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100173398 (USP39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100173398
NCBI-ProteinID:
NP_001126415
Ensembl:
ENSPPYG00000012222
UniProt:
Q5R761
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Position
12:complement(46420003..46464685)
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AA seq
565 aa
AA seq
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MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR
EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISPSHVNAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHENTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtctaagcgggagtctcgcggttccactcgcgggaagcgagagtctgag
tcgcggggcagctccggtcgcgtcaagcgggagcgagatcgggagcgggagcctgaggcg
gcgagctcccggggcagccctgtgcgcgtgaagcgggagttcgagccggcgagcgcgcgc
gaggccccggcttctgttgtcccgtttgtgcgggtgaagcgggagcgcgaggtcgatgag
gactcggagcctgagcgggaggtgcgagcaaagaatggccgagtggattctgaggaccgg
aggagccgccactgcccgtacctggacaccattaacaggagtgtgctggactttgacttt
gagaaactgtgttctatctccccctcacacgtcaatgcttatgcctgtctggtgtgtggc
aagtactttcaaggccggggtttgaagtctcacgcctacattcacagtgtccagtttagc
caccatgttttcctcaacctccacaccctcaagttttactgccttccggacaactatgag
atcatcgattcctcattggaggatatcacgtatgtgttgaagcccactttcacaaagcag
caaattgcaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacttac
ctgccgggtattgtgggactgaataacataaaggccaatgattatgccaacgctgtcctt
caggctctatctaatgttcctcctctccggaactactttctggaagaagacaattataag
aacatcaaacgtcctccaggggatatcatgttcttgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtgtctccccatgagatgctt
caggcagttgtactttgcagtaagaagacttttcagatcaccaaacaaggagatggcgtt
gactttctgtcttggtttctgaatgctctgcactcagctctggggggcacaaagaagaaa
aagaagactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
ccccatcctgatctgccagcagaagaaaaagagcagttgctccataatgacgagtaccag
gagacaatggtggagtccacttttatgtacctgacgctggaccttcctactgcccccctc
tacaaggacgagaaggagcagctcatcattccccaagtgccactcttcaacatcctggct
aagttcaatggcatcactgagaaggaatataagacttacaaggagaactttctgaagcgc
ttccagcttaccaagttgcctccatatctaatcttttgtatcaagagattcactaagaac
aacttctttgttgagaagaatccaactattgtcaatttccctattacaaatgtggatctg
agagaatacttgtctgaagaagtacaagcagtacacgagaataccacctatgacctcatt
gccaacatcgtgcatgacggcaagccctccgagggctcctaccggatccacgtgcttcat
catgggacaggcaaatggtatgaattacaagacctccaggtgactgacatccttccccag
atgatcacactgtcagaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcttga
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integrated database retrieval system
