KEGG   Pongo abelii (Sumatran orangutan): 100173829
Entry
100173829         CDS       T01416                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03020  RNA polymerase
pon03420  Nucleotide excision repair
pon04623  Cytosolic DNA-sensing pathway
pon05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100173829 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100173829 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100173829 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pon03021]
    100173829 (POLR2E)
   03400 DNA repair and recombination proteins [BR:pon03400]
    100173829 (POLR2E)
Transcription machinery [BR:pon03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100173829 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     100173829 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     100173829 (POLR2E)
DNA repair and recombination proteins [BR:pon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100173829 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 100173829
NCBI-ProteinID: NP_001126823
Ensembl: ENSPPYG00000009305
UniProt: Q5R587
LinkDB
Position
20:complement(844333..851629)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctctggaaaatccgcaagaccatcatgcagctg
tgccacgaccgtggctacctggtgacccaggacgagcttgaccagaccctggaggagttc
agagcccaatttggggacaagccgagtgaggggcggccgcggcgcacggacctcaccgtg
ctggtggcccacaacgatgaccccaccgaccagatgtttgtgttctttccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcgcatgcaggaggagaacatcacg
cgggccctcatcgtggtgcagcagggcatgacaccctccgccaagcagtctctggttgac
atggcacccaagtacatcctggagcagtttctgcagcaggagctactcatcaacatcacg
gagcatgagctggtccctgagcatgtcgtcatgaccaaggaggaggtgacagagctgctg
gcccgatataagctccgagagaaccagctgcccaggatccaggcgggggaccctgtggcg
cgctactttgggataaagcgtgggcaggtggtgaagatcatccgacccagtgagacggcg
ggcaggtacatcacctaccggctggtgcagtag

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