Pongo abelii (Sumatran orangutan): 100173840
Help
Entry
100173840 CDS
T01416
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03013
Nucleocytoplasmic transport
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100173840 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
100173840 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100173840 (THOC5)
03041 Spliceosome [BR:
pon03041
]
100173840 (THOC5)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100173840 (THOC5)
Spliceosome [BR:
pon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100173840 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100173840
NCBI-ProteinID:
NP_001360801
Ensembl:
ENSPPYG00000011692
UniProt:
A0A2J8UUV6
LinkDB
All DBs
Position
23:complement(35934800..35983786)
Genome browser
AA seq
683 aa
AA seq
DB search
MSSESGKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSHLVKWVTIAHEDYMELHFTKDIV
DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNSNDDNIRA
MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgggcaaaaaacggaagcccaaagtgatccgaagcgatggagcccca
gctgaaggaaagcggaatcgatctgacaccgagcaggaaggtaaatactacagtgaggag
gccgaggtggatctgcgggaccctggcagagactatgagttatacaagtatacctgccag
gagctacagaggctgatggctgagatccaagacctgaagagtaggggtggcaaggatgtg
gcaatcgaaatagaagaacggaggatccagagctgtgtgcatttcatgactctaaagaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagacccacgaggctaag
cagaaagtagatgcctatcacctgcagctccagaacctgttgtatgaggtgatgcaccta
cagaaggagatcaccaaatgtttggagtttaagtcaaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctccaccagatatcagcaaggctgaagtcaccatg
ggagaccctcaccagcaaacactagcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctatccaacaaggagaagattctcaaggagattgag
gtgaagaaggagtacctcagcagcctccagccccgcctcaacagcatcatgcaggcttcc
cttccggtgcaggagtacttgtttatgccatttgaccaggctcacaagcagtatgagaca
gccagacacctgccgcctcccctctatgtcctctttgttcaggccactgcgtatgggcag
gcctgtgataagacgttatctgtggcaatcgaaggcagtgtggatgaagccaaggctctg
ttcaagcctccagaggactcccaagatgacgagagtgactcggatgctgaggaggagcag
accacgaaacgccggagacccacgctgggggttcagttggacgacaaacgcaaagagatg
ctgaagaggcacccactgtctgtcatgctcgacctgaagtgcaaagatgacagtgtgctt
cacctgactttctactacctcatgaacctcaacatcatgacagtaaaagccaaagtgacg
actgccacggagctgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtc
ctgagttgcttgtatcctggggatcatggaaagaaaactccgaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgagcgactatgtacttgagctaggtcacccc
tatttgtgggtacagaagctgggtggcctccacttccccaaagagcagccccagcaaaca
gtgattgctgaccactcgctgagcgccagccacatggaaaccactatgaaacttctgaag
accagggtgcagtcccgcctggccctccacaaacagtttgcatccctagaacatggcatt
gtgccagttaccagtgattgccagtacctcttccctgccaaggttgtctctcacctggtg
aaatgggtgacaattgcccatgaggattacatggagctgcatttcaccaaagacattgtg
gatgcaggactggctggggacaccaatctctactacatggcgctcatcgaaaggggcaca
gccaaactgcaggccgctgtggtgttgaaccctggctactcctccatcccacctattttc
cagctttgtttgaactggaaaggggagaaaaccaacagcaacgatgacaacattcgggcc
atggagggcgaagtcaatgtgtgctacaaggagctgtgtggcccttggcccagccaccag
ctgttgaccaaccagctgcagcggctgtgtgtgctgctggatgtttacctggagaccgag
agccacgacgacagtgtggaggggcccaaggaatttccccaggagaagatgtgtctgcgg
ctcttcaggggtcccagcaggatgaagccgtttaaatacaaccatcctcagggattcttc
agccatcgctga
DBGET
integrated database retrieval system
