Pongo abelii (Sumatran orangutan): 100173965
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Entry
100173965 CDS
T01416
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04110
Cell cycle
pon04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100173965 (SMC3)
04114 Oocyte meiosis
100173965 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100173965 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pon00535
]
100173965 (SMC3)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100173965 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
100173965 (SMC3)
Proteoglycans [BR:
pon00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100173965 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
100173965
NCBI-ProteinID:
NP_001126947
Ensembl:
ENSPPYG00000002645
UniProt:
Q5R4K5
A0A2J8W780
LinkDB
All DBs
Position
8:117593633..117629870
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggttttcgaagttacagagatcaaacaattgta
gatcccttcagttcaaaacataatgtgattgtgggcagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagtgatgagtttagtcatcttcgtccagaacag
cggttggctttattgcatgaaggtactggtcctcgtgttatttctgctttcgtggagatt
atttttgataattcagacaaccggttaccaatcgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaggatcagtatttcttagataagaagatggtcacgaaaaatgat
gtgatgaacctccttgaaagcgctggtttttctcgaagcaatccttattatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattctcagagattaaagctattaaga
gaagtagctggtactagagtgtatgatgaacgaaaggaagaaagcatctccttaatgaaa
gaaacagagggcaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
catacattagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatataccatttacaatcaggaacttaacgagactcgtgccaaacttgat
gagctttctgctaagcgagagactagtggagaaaaatccagacaattaagagatgctcag
caggatgcaagagataaaatggaggatatcgaacgccaagttagagaattgaaaacaaaa
atttcagctatgaaagaagaaaaagaacagcttagtgctgaaagacaagaacaaattaag
cagaggactaagttggagcttaaagccaaggatttacaagatgaactagcaggcaatagt
gaacaaaggaaacgtttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtaaaagagaaagaagaacga
ggaattgctagattggctcaagctacccaggaaagaacggatctttatgcaaagcaaggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaagacactgaagcaaataaagagaaaaatctggagcagtataataaactggaccaggat
cttaatgaagtcaaagctcgagtagaagaactggacagaaaatattacgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaactacttgtggagagaagagaatgcagaacag
caagcacttgctgctaaaagagaagatcttgaaaagaagcaacaacttcttagagcagca
acaggaaaggccattttaaatggaatagacagcataaacaaagtgctagaccactttcgt
cgaaaaggaataaaccagcatgttcaaaatggctatcatggtattgtaatgaataacttt
gaatgtgaaccagctttctacacatgcgtggaagtcactgctggaaacaggttattttat
cacattgttgattcagatgaagtcagcacgaagattttaatggagtttaataaaatgaat
cttcccggagaggttacttttctgcctcttaacaagttagatgtcagggatacagcctat
cctgaaaccaatgatgctattcctatgatcagcaaactgaggtacaatcccagatttgac
aaagctttcaaacatgtgtttggaaagactcttatctgtcgtagcatggaagtttcaacc
cagctggcccgtgctttcactatggactgtattactttggaaggtgaccaagtcagtcat
cggggtgctctaactggaggttattatgacacaaggaagtctcgacttgaattgcaaaaa
gatgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaaccta
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcaacag
atcgagacccagcaaaggaaatttaaagcatctagagatagcatattatcagaaatgaag
atgctaaaagagaagaggcagcagtcagagaaaaccttcatgcctaagcaacgtagctta
cagagtttggaggcaagcttgcacgctatggagtctaccagagagtcattgaaagcagaa
ctgggaactgatttgctttctcaactgagtttggaagatcagaagagagtagatgcgctg
aatgatgagattcgtcaacttcagcaggaaaacagacagttgctaaatgaaagaattaaa
ttagaaggtattattactcgagtagagacttatctcaatgagaatctgagaaaacgcttg
gaccaagtagaacaggaacttaatgagctgagagagacagaagggggtactgttctcact
gccacaacatcagaacttgaagccatcaataaaagagtaaaagacactatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagcttcagaagagt
atggagcgctggaaaaatatggaaaaagaacatatggatgctataaatcatgatactaaa
gaactggaaaagatgacaaatcggcaaggcatgctattgaagaagaaagaagagtgtatg
aagaaaattcgagaacttggatcacttccccaggaagcatttgaaaagtaccagacactg
agcctcaaacagttgtttcgaaaacttgagcagtgcaacacagaattaaagaagtacagc
catgttaacaaaaaggctttggatcagtttgtaaatttctctgagcagaaagaaaagtta
ataaagcgacaagaagagttagataggggttacaaatctatcatggagctgatgaatgta
cttgaacttcggaaatatgaagctattcagttaactttcaaacaggtatccaagaacttc
agtgaagtattccagaagttagtacctggtggcaaagctactttggtaatgaagaaagga
gatgtggagggcagtcagtctcaagatgaaggagaagggagtggtgagagtgagaggggt
tctggctcacaaagcagtgtcccatcagttgaccagtttactggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcaacagctttcaggtggacagaaa
tccttggtagccctcgctctgatttttgccattcagaaatgtgacccggctccattttac
ttgtttgatgagattgaccaggctctggatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcagtttattacaactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
atcacagcggagatggccaaagactttgtagaagatgataccacacatggttaa
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integrated database retrieval system
