Pongo abelii (Sumatran orangutan): 100174064
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Entry
100174064 CDS
T01416
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100174064 (SYNPO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
100174064
NCBI-ProteinID:
NP_001127038
Ensembl:
ENSPPYG00000015952
UniProt:
Q5R441
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Position
4:159288237..159299947
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AA seq
685 aa
AA seq
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MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
ASKTGILEESMARRGTRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
FALGAEASNFQQEPAPRDRASPAAVEEAVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
APRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtactcagaggaggctagcttgctgcggcacctggagaaggtggccagtgag
gaggaagaggtaccactggtggtttatctaaaggagaatgcagcactgctgacggccaat
gggctgcacctgtcccaaaaccgagaggcccagcagtcctcaccggccccacctccagct
gaggtccacagcccagctgcagatgtcaaccaaaaccttgcctcgcccagtgccacgctc
accacaccaacttctaacagcagccacaatccgccagccaccgatgtcaatcagaaccca
ccggcaactgtcgtcccacagagcctgccactttctagcatccaacagaattcctcagag
gcccaactcccatccaatggcacagggcctgcttccaaacccagcaccctgtgtgctgat
gggcaaccccaggcaccggctgaggaggtgagatgcagcacactcctaattgacaaggta
tcaactccagctaccaccaccagcaccttctccagagaagctacgctcatccccagctcc
aggcccccagcctcagatttcatgtccagctccctgctcattgacatccagcccaacacc
ctagtggtgtcagcagatcaagagatgtctgggcgagcagctgccaccacgcccaccaag
gtctacagtgaggtccacttcacactggccaagcccccatcagtggtcaacaggacggcc
aggccttttgggatccaggcgccagggggcaccagccaaatggagaggagccccatgcta
gagagacgacattttggggagaaggccccagctccccagccccccagtttgccagacagg
agcccccggccacagagacacataatgtcccgcagccccatggtggaaaggaggatgatg
gggcagcgaagcccggcctcagagagacgccccttggggaacttcaccgcaccccccacc
tacactgagaccttgtccacagcccctctggcttcctgggtgaggtctcctccctcatat
tctgtcctgtatcccagctctgaccccaagtcttctcatctgaagggccaggcggttcct
gccagcaagacgggcattctggaggagtcgatggcccgccggggcacccgcaaatccatg
tttaccttcgtggagaagcccaaggtgaccccgaatccagacctgctggatctggtacag
acagcggatgagaagcggcggcagagggaccagggggaggtaggcgtggaggaggagccc
ttcgcactgggggccgaggcctccaacttccagcaggagccagcacctcgcgacagggcc
agccccgcggcggtggaggaggcggtcccagagtgggcctcctgcctcaagtcaccccgc
atccaggccaagccgaagcccaaacccaaccagaacctctccgaggcctctgggaagggg
gctgagctctacgcccgccgccagtcacggatggagaaatatgtcatcgagtcttcaagc
cacacgccagagctggcccgctgcccatcacctaccatgtcgctgccttcctcctggaaa
taccccactaacgcccctggggccttccgagtggcatcccgaagcccagcccggaccccg
cctgcctccctctaccatggctacctgcctgagaacggggtcctgcgcccagagcccacc
aagcagccgccgtaccagctgcggccctcgctctttgtcctctcacctatcaaggagcct
gccaaggtctcaccaagagctgcctcgcccgccaagcccagctccttggacctggtgccc
aacctgcccaagggggctctccctccgtctcctgccctgcctcggccctcccgctcctcg
ccgggcctctacacctcccccggccaggacagcctgcagcccactgccgtgagtcctcct
tacggcggtgacatctcccccgtgtctccctccagggcgtggtctccccgagccaagcag
gcccccaggccctccttctctacccggaacgccgggatcgaggctcaggtgtggaagcct
tccttctgcttcaagtaa
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