Pongo abelii (Sumatran orangutan): 100174420
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Entry
100174420 CDS
T01416
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X2
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100174420 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pon03400
]
100174420 (XPC)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100174420 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
100174420
NCBI-ProteinID:
XP_002813173
Ensembl:
ENSPPYG00000013401
UniProt:
H2P9B5
LinkDB
All DBs
Position
2:complement(6782788..6816127)
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AA seq
943 aa
AA seq
DB search
MARKRAAGREPRGREPRSQKSKAKSKARREEEEEEEEDAFEDEKPPKKSLPSKVSQGKRK
RGCSHPGRSADGPAKKKVAKVTVKSENLKVIKDEALSDGDDLRDVPSDLKKAHHPKRGAT
MNEDSNEEEEESENDWEEVEELTEPVLGDVRESTAFSRSLLPVKPVEIEIETPEQAKTRE
RSEKIKLEFETHLRRAMKRFNKEVHEDTHKVHLLCLLANGLYRNNICSQPDLHAIGLSIV
PARFTRVLPRDVDTYYLSNLVKWFIGTFTVNAELSASEQDNLQSTLERRFAIYSARDDEE
LVHIFLLILRALQLLTRLVLSLHPIPLKSATAKGKKPSKERLTADPGASSETSSQVLENH
TKPKTSKGTKQEETFAKGTCKPSAKGKRNKGGRKKRSKPSSSEEDEGPGDKQEKATQRRP
HGRERRVASRVSYKEESGSDEAGSGSDFELSSGEASDPSDEDSEPGPPKQRKAPAPQRTK
AGSKSASRTQRGSHHKDPSLPAASSSSSSSKRGKKMSSDGEKAEKRSIAGVDQWLEVFCE
QEEKWICVDCVHGVVGQPLTCYKYATKPVTYVVGIDSDGWVRDVTQRYDPAWMTVTRKCR
VDAEWWAETLRPYQSPFMDREKKEDLEFQAKHMDQPLPTAIGLYKNHPLYALKRHLLKYE
AIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKKARVVRLGEVPYKMVKGFSNRARKA
RLAEPQLREENDLGLFGYWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLP
NLHRVARKLDIDCVQAITGFDFHGGYSHPVTDGYIVCEEFKDVLLTAWENEQAIIEKKEK
EKREKRALGNWKLLAKGLLIRERLKRRYGPKSEAAAPHTDAGGGLSSDEEEGTSSQAEAA
RILAASWPQNREDEEKQKLKGGPKKTKREKKAAASHLFPFEKL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaaacgcgcggccggcagggagccgcggggacgcgaaccgcgcagccagaaa
tccaaggccaagagcaaggcccggcgtgaggaggaggaggaggaggaggaggatgccttt
gaagatgagaaacccccaaagaagagccttccttccaaagtttcacaaggaaagaggaaa
agaggctgcagtcatcctgggcgttcagcagatggtccagcaaaaaagaaggtggccaag
gtgactgttaaatctgaaaacctcaaggttataaaggatgaagccctcagcgatggggat
gacctcagggacgttccaagtgacctcaagaaggcacaccatccgaagagaggggctacc
atgaatgaagacagcaatgaagaagaggaagaaagtgaaaatgattgggaagaggttgaa
gaacttactgagcctgtgctgggtgacgtgagagaaagtacagccttctctcgatctctt
ctgcctgtgaagccagtggaaatagagattgaaacgccagagcaggcgaagacaagagaa
agaagtgaaaagataaaactggagtttgagacacatcttcggagggcgatgaaacgtttc
aataaagaggtccacgaggacacacacaaggttcaccttctctgcctgctagcaaatggt
ttgtatcgaaataacatctgcagccagccagatctgcatgctattggcctctccatcgtc
ccagcccgctttaccagagtgctgcctcgagatgtggacacctactacctctcaaacctg
gtgaagtggttcattggaacatttacagttaatgcagagctttcagccagtgaacaagat
aacctgcagagtacattggaaaggagatttgctatttactctgctcgagatgatgaggaa
ttggtccatatattcttactgattctccgggctctgcagctcttgacccggctggtattg
tctctacacccaattcctctgaagtcagcaacagcaaagggaaagaaaccttccaaggag
agattgactgcggatccgggagcctcctcagaaacttccagccaagttctagaaaaccac
accaaaccaaagaccagcaaaggaaccaaacaagaggagacctttgctaagggcacctgc
aagccaagtgccaaagggaagaggaacaagggaggcagaaagaaacgaagcaagccctcc
tccagtgaggaagatgagggcccaggagacaagcaggagaaggcaacccagcgacgtccg
catggccgggagcggcgggtggcctccagggtgtcttataaggaggagagtgggagtgat
gaggctggcagtggctctgattttgagctctccagtggagaagcctctgatccctctgat
gaggattccgaacctggccctccaaagcagaggaaggcccccgctcctcagaggacaaag
gctgggtccaagagtgcctccaggacccaacgtgggagccatcataaggacccaagcttg
ccagcggcatcctcaagctcttcaagcagtaaaagaggcaagaaaatgtccagcgatggt
gagaaggcggaaaaaagaagcatagctggtgtagaccagtggctagaggtgttctgtgag
caggaggaaaagtggatatgtgtagactgtgtgcacggtgtggtgggccagcctctgacc
tgttacaagtatgccaccaagcccgtgacctatgtggtgggcattgacagtgatggctgg
gtccgagatgtcacacagaggtacgacccagcctggatgacagtgacccgcaagtgccgg
gttgatgctgagtggtgggccgagaccttgagaccataccagagcccatttatggacagg
gagaagaaagaagacttggagtttcaggcaaaacacatggaccagcctttgcccactgcc
attggcttatataagaaccaccctctgtatgccctgaagcggcatctcctgaaatatgag
gccatctatcctgagacagctgccatccttgggtattgtcgtggagaagcggtctactcc
agggattgtgtgcacactctgcattccagggacacatggctgaagaaagcaagagtggtg
aggcttggagaagtaccctacaagatggtgaaaggcttttccaaccgtgctcggaaagcc
cgacttgctgagccccagctgcgggaagaaaatgacctgggcttgtttggctactggcag
acagaggagtatcagccccccgtggccgtggacgggaaggtgccccggaacgagtttggg
aatgtgtaccttttcctgcccagcatgatgcctattggctgtgtccagctgaacctgccc
aatctacaccgcgtggcccgcaagctggacatcgactgtgtccaggccatcactggcttt
gatttccatggcggctactcccatcctgtgactgatggatacatcgtctgcgaggaattc
aaagacgtgctcctgactgcctgggaaaatgagcaggccatcatcgaaaagaaggagaag
gagaaaagggagaagcgggctctagggaactggaagctgctggccaaaggtctgctcatc
agggagaggctgaagcgtcgctacgggcccaagagtgaggcagcagctccccacacagat
gcaggaggtggactctcttctgatgaagaggaggggaccagctctcaagcagaagcggcc
aggatactggctgcctcctggcctcaaaaccgagaagatgaagaaaagcagaagctgaag
ggtgggcccaagaagaccaaaagggaaaagaaggcagcagcttcccacctgttcccattt
gagaagctgtga
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