Pongo abelii (Sumatran orangutan): 100174444
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Entry
100174444 CDS
T01416
Symbol
SDC4
Name
(RefSeq) syndecan-4 precursor
KO
K16338
syndecan 4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04512
ECM-receptor interaction
pon04514
Cell adhesion molecule (CAM) interaction
pon04820
Cytoskeleton in muscle cells
pon05205
Proteoglycans in cancer
pon05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100174444 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
100174444 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100174444 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100174444 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
100174444 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pon00535
]
100174444 (SDC4)
Proteoglycans [BR:
pon00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
100174444 (SDC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
NCMAP
Motif
Other DBs
NCBI-GeneID:
100174444
NCBI-ProteinID:
NP_001127378
Ensembl:
ENSPPYG00000038657
UniProt:
Q5RAT9
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All DBs
Position
21:complement(49593961..49617136)
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AA seq
198 aa
AA seq
DB search
MAPARLFALLLLFVGGVAESIRETEVIDPQDLLEGRYFSGALPDDEDVVGPGQESDDFEL
SGSGDLDDLEDSIIGPEVIHPLVPLDNHIPERAGSGSQVPTEPKKLEENEVIPKRISPIE
ESEDVSNKVSMSSTVQGSNIFERTEVLAALIVGGIVGILFAVFLILLLMYRMKKKDEGSY
DLGKKPIYKKAPTNEFYA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcccgtctgttcgcgctgctgctgctcttcgtaggcggagtcgccgagtcg
atccgagagactgaggtcatcgacccccaggacctcctagaaggccgatacttctccgga
gccctaccagacgatgaggatgtagtgggccccgggcaggaatctgatgactttgaactg
tctggctctggagatctggatgacttggaagactccatcatcggccctgaagttatccat
cccttggtgcctctagataaccacatccctgagagggcagggtctgggagccaagtcccc
accgaacccaagaaactggaggagaatgaggttatccccaagagaatctcacccattgaa
gagagtgaggatgtgtccaacaaggtgtcaatgtccagcactgtgcagggcagcaacatc
tttgaaagaacggaggtcctggcagctctgattgtgggtggcatcgtgggcatcctcttt
gccgtcttcctgatcctactgctcatgtaccgtatgaagaagaaggatgaaggcagctat
gacctgggcaagaaacccatctacaagaaagcccccaccaatgagttctacgcgtga
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integrated database retrieval system