Pongo abelii (Sumatran orangutan): 100294535 Help Entry 100294535         CDS       T01416                                  Symbol SMARCC2 Name (RefSeq) SWI/SNF complex subunit SMARCC2   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism pon  Pongo abelii (Sumatran orangutan) Pathway pon03082   ATP-dependent chromatin remodeling pon04714   Thermogenesis pon05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:pon00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100294535 (SMARCC2)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     100294535 (SMARCC2)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     100294535 (SMARCC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pon03021]     100294535 (SMARCC2)    03036 Chromosome and associated proteins [BR:pon03036]     100294535 (SMARCC2) Transcription machinery [BR:pon03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      100294535 (SMARCC2) Chromosome and associated proteins [BR:pon03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     100294535 (SMARCC2)    PBAF complex     100294535 (SMARCC2)    GBAF(ncBAF) complex     100294535 (SMARCC2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 Chromo Motif Other DBs NCBI-GeneID:  100294535 NCBI-ProteinID:  NP_001153254 Ensembl:  ENSPPYG00000004648 UniProt:  Q5RD55 LinkDB All DBs Position 10:complement(54065324..54092464) Genome browser AA seq 1245 aa AA seqDB search MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE SEKSDGDPIVDPEKEKEPKEGQEEALKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA PASVVPAPAGSGAPPGSLGPSEQIGQGGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN LPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ SPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ NT seq 3738 nt NT seq  +upstreamnt  +downstreamnt atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc gtgacccagttcgacaacgtgcggctgtggctcggcaagaactataagaagtatatacaa gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt ttcctagatttcaaagcgggaggctccctgtgccacattcttgcagctgcctacaaattc aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat gtggaaatgtttatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct aacatttttctgtgcccagaaattgagcccaaactactagggaaattaaaggacattatc aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct gtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag gttcttctgcactggggctactatcctgacagttatgacacatggatcccagcaagtgaa attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag tggatcctggacaccgacaccttcaatgaatggatgaatgaggaagactacgaagtaaat gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacactgacagatgag gtgaacagcccggattcagatcgacgggacaagaaggggggaaactataagaagaggaag cgctctccctctccttcaccaaccccagaagcgaagaagaaaaatgctaagaaaggtccc tcaacaccttacactaagtcaaagcgtggccacagagaagaggagcaagaagacctgaca aaggacatggacgagccatcaccagtccccaatgtagaagaggtgacgcttcccaaaaca gtcaacacaaagaaagactcagagtcggccccagtcaaaggcggcaccatgactgacctg gatgaacaggaagatgaaagcatggagacgacgggcaaggatgaggatgagaacagtacg gggaacaagggagagcagaccaagaatccagacctgcatgaggacaacgtgactgaacag acccaccacatcatcattcccagctacgctgcctggtttgactacaatagcgttcatgcc attgagcggagggctctccccgagttcttcaacggcaagaacaagtccaagactccagag atctacctggcctatcgaaactttatgattgacacttaccgactgaacccccaagagtat cttacctctaccgcctgccgccgaaacctagcgggtgatgtctgtgccatcatgagggtc catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca accccaatggggcctccgcctacctctcacttccatgtcttggctgacacaccatcaggg ctggtgcctctgcagcccaagacacctcagggccgccaggttgatgctgataccaaggct gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag ctgcagacctctgcttcccaacaaatgctcaactttcctgacaaaggcaaagagaaacca acagacatgcaaaactttgggctgcgcacagacatgtacacaaaaaagaatgttccctcc aagagcaaagctgcagccagtgccactcgtgagtggacagaacaggaaaccctgcttctc ctggaggcactggaaatgtacaaagatgactggaacaaagtgtccgagcatgtgggaagc cgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccatacctg gaggactcagaggcctccctaggccccctggcctaccaacccatccccttcagtcagtcg ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatccccgagtcgcc tctgctgctgcaaagtcagccctagaggagttctccaaaatgaaggaagaggtacccacg gccttggtggaggcccatgttcgaaaagtggaagaagcagccaaagtaacaggcaaggcg gaccctgccttcggtctggaaagtagtggcattgcgggaaccacctctgatgagcctgaa cggattgaggagagcgggaatgacgaggctcgggtggaaggccaggccacagatgagaag aaggagcccaaggaaccccgagaaggagggggtgctatagaggaggaagcaaaagagaaa accagcgaggctcccaagaaggatgaggagaaagggaaagaaggcgacagtgagaaggag tccgagaagagtgatggagacccaatagtcgatcctgagaaggagaaggagccaaaggaa gggcaggaggaagcgctgaaggaagtggtggagtctgagggggaaaggaagacaaaggtg gagcgggacattggcgagggcaacctctccaccgctgctgctgccgccctggccgccgcc gcagtgaaagccaagcatttggccgctgttgaggaaaggaagatcaaatctttggtggcc ctgctggtggagacccagatgaaaaagttggagatcaaacttcggcactttgaggagctg gagactatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc gacagacaagccttccacatggaacagctgaagtatgcagagatgagggctcggcagcag cacttccaacagatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc cagcctatccccccgacaggggctgctgggccacctgcagtccatggcttggctgtggct ccagcctctgtagtccctgctcctgctggcagtggggcccctccaggaagcttgggccct tctgaacagattgggcagggagggtcaactgcagggccacagcagcagcaaccagctgga gccccccagcctggggcagtcccaccaggggttcccccccctggaccccatggcccctca ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct cctcctcctgctccatccatcatcccatttggtagtctagctgactccatcagtattaac ctcccccctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcact ctccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccaa agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca gacccaggcacccccctgcctccagaccccacagccccgagcccaggcacggtcacccct gtgccacctccacagtga

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