Pongo abelii (Sumatran orangutan): 100431370
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Entry
100431370 CDS
T01416
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100431370 (SOX30)
Transcription factors [BR:
pon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100431370 (SOX30)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100431370
NCBI-ProteinID:
XP_002816179
Ensembl:
ENSPPYG00000031159
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All DBs
Position
4:complement(166317450..166346904)
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AA seq
720 aa
AA seq
DB search
MEPPPSSPTLSAAASATLASSCGEAVASSLQPAVRRLLQVKPEQVLLLPQPQARNEEAAA
SPAQARLLQFRPDLRLLPPPAASDGATTRPELHPVQSGALHVKAKKQELGPSLDQSVGPR
GAVETGPRASRVVKLEGPGPALGYFRGDEKGKLEAEEIMRDAMQGGEGKSPAAIREGVIK
TEEPERLLEDCRLGTEPASNDLVHGSAEVILAPTSGAFGPHQQDLRIPLTLHTVPPGARI
QFQGAPPSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDR
NGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKI
KEKHREEFPGWVYQPRPGKRKRFPLSASNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPS
LQNPITHPVGETSPAIQLPTPTVQRPSPVTLFQPSVSSAAQVAVQDPSLPLYPALPPQHF
AGPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASNAHARFATSTIQPPKEYSSISP
CPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSR
PPFGYGNFPSSMPECLSYYEDRYPKHEGIFSALSRDYSFRDYSSECAHSENSRSCENMNG
TSYYNSHSHSGEEDLNPVPQLDIGTLENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagccccctccgtcgtctcccacattgagcgcggccgccagtgcgaccttggcctcg
tcgtgcggggaggccgtggcgtccagcttacagcccgcggtgcggcggctgctgcaggtg
aagccagagcaggtgttgctgctaccacagcctcaggcccggaacgaggaagccgctgcc
tcgcccgcgcaggcccggctgttgcagttcaggccggacctgcggctcctgccgccgccg
gcagcgtcagacggcgccaccaccaggcccgagttgcacccggtgcagtccggggcgctg
catgtcaaggccaagaagcaggagctggggcccagcctggatcagtcagtggggcctcgg
ggggccgtcgaaaccggtcctagagcctccagggtggtcaagttggaaggtcccgggccg
gccctcggctacttccgaggggacgagaagggcaagctggaggcggaggagatcatgaga
gacgcgatgcaaggcggggaaggcaaaagcccggcggccatccgagaaggtgtgatcaaa
acggaggaacccgagagactcctcgaggactgcaggctcggcacggagcccgcatccaat
gacctggttcatggcagcgcggaggtcatcttggctccaacgtccggtgcctttgggccg
caccagcaagaccttaggatccctttgactctccacacggtcccccctggggcccggatc
cagtttcagggagctccgccttcagagctgataagattgaccaaagtccccctgacacca
gtgcctattaaaatgcagtccctactggagccttctgtaaaaattgaaaccaaagatgtc
ccgctcaccgtgttgccctcagatgcaggcataccagatactcccttcagtaaggacaga
aatggtcatgtgaagcgacccatgaacgcatttatggtttgggcaaggatccaccgacca
gcactagccaaagctaacccagcagccaacaatgcagaaatcagtgtccagcttgggtta
gagtggaacaaacttagtgaagaacaaaagaaaccctattacgatgaagcacaaaagatt
aaagaaaagcacagagaggaatttcctggttgggtttatcagcctcgtccagggaagcga
aaacgattccctctaagtgcttccaatgtattttctggtaccacacagaatatcatctct
acaaatcctacaacagtttatccttaccgctcacctacgtactctgtggtaattcccagc
ctacagaatcccatcactcatccagttggtgaaacctcacctgctatccagctgcccaca
cctacagtccagcgcccaagccctgtcacacttttccagcccagcgtctccagtgctgct
caggtggctgtccaggatccaagtctacctctctatccagcactcccaccccaacacttt
gctgggccttcccaaacagacactcatcagctgcattctgaagccactcacactgtgaag
caacccacccctgtctctctagagagcgccaacaggatttcaagtagtgcaagtaatgcc
catgccagatttgcaacttcgaccatccaacctcctaaggagtattccagcatttcccct
tgtcccagaagtgctccaatcccccaggcttctcccattccacacccacatgtttaccag
ccccctccccttggccatccagccacactgtttggcacaccaccaagattctcttttcat
cacccttacttcctacccggacctcactacttcccatcaagtacatgcccttacagccgg
cctccctttggctatggaaattttccgagttcaatgccagaatgccttagttattatgaa
gacaggtacccaaaacatgagggtatattttcagctttaagtagagactattcttttaga
gactactcaagtgaatgcgcacacagcgaaaattctcggagttgtgagaacatgaatgga
acttcttactataacagtcatagccacagtggggaagaagacttaaaccctgtgcctcag
ctggacattggaaccttggagaatgtcttcacagccccgacatcaactccttctagcatc
cagcaagtcaatgtcactgacagtgatgaggaggaagaagaaaaagtgctcagggattta
taa
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