Pongo abelii (Sumatran orangutan): 100432327
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Entry
100432327 CDS
T01416
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X2
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100432327 (DDX20)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100432327 (DDX20)
Spliceosome [BR:
pon03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100432327 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
100432327
NCBI-ProteinID:
XP_009244599
Ensembl:
ENSPPYG00000001026
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All DBs
Position
1:complement(120958195..120985519)
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AA seq
853 aa
AA seq
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MWPHRKTGRKDLWDPRLPLSTARSDGTATMAAAFEAPGALAAVATGMPAEHVTVQVPAPE
PTPGPMRSLRTAQDLSSPRTRTRDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLK
AIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVIT
AIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILD
EADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDP
SLIGLKQYYRVVNSYPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSS
KGFPAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWE
TYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIAQKCNINLLPLPDPIPSGLMEECVDW
DVEVKAAVHTYGIASVPNQPLKKQIQKIERTLQIQKAHGDHMASSRNNSVSGLSVKSKNN
TKQKLPVKSHSECGIIEKAASPKELGCDRQSEEQMKNSVQTPVEKSTNSQHQVKEALPVS
LPQIPCLSSFKIHQPYTLTFAELVEDYEHYIKEGLEKSVEIIRHYTGPGDQTVNPQNGFV
RNKVTEQRVPVLASSSQSGDSESDSDSYSSRTSSQSKGNKSYLEGSSDNQLKDSESTPVD
DHISLEQPPNGIDTPNPEEYQESPGIQIKTRHKEGASQRAKQSRRNLPRRSSFRLQTEAQ
EDDWYDCHRETHLSFSDTYQDYEEYWRAYYRAWQEYYAAASHSYYWNAQRHPSWMAAYHM
NTIYLQEMMHGNQ
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctcacagaaagactggaagaaaagatttgtgggatccccgcctccccttaagc
accgcgagatctgacggcacggctaccatggcggcggcgtttgaagccccgggagcctta
gcggcagtggcgactggtatgccggctgagcatgtgaccgtgcaggtcccggccccagag
ccaacacccgggcctatgaggagcctgcggaccgctcaggatctcagcagcccgcggacc
cgcacgagggatgtgctgttggcggagcctgctgacttcgagtcactgctgctttcgcgg
ccggtgctggaggggctgcgggcggccggcttcgagaggccctcgccggtgcagctcaag
gccatcccgctggggcgctgcgggctcgatttaattgttcaagctaaatctggcaccggg
aaaacctgtgtgttctccaccatagctttggactctcttgttcttgaaaacttaagtacc
cagattttgatcttggcccctacaagagaaattgctgtacagatacattctgttattaca
gccattggaataaaaatggaaggcttagagtgtcatgtttttattggagggaccccattg
tcacaagacaaaaccagacttaaaaagtgtcatattgctgttggatctcctggcagaatt
aagcaactcatagaacttgactacttgaacccaggcagtatacgcctctttattcttgat
gaagcagataagcttttagaagaaggcagcttccaggagcaaataaattggatttattct
tccttgcctgccagtaaacagatgctggcagtgtcagctacttatcccgaatttttggct
aatgctttgacaaagtacatgagagatcccacttttgtaagactgaattccagtgatcca
agtctcataggtttgaagcagtattacagagttgtcaattcgtaccctttggcacataag
gtttttgaggaaaagactcagcatttacaggaactgttcagcagaattccatttaatcaa
gctttagtcttttctaatttgcacagcagagcacaacatttggctgatatcctttcttct
aaaggctttcctgctgagtgcatttcaggcaatatgaatcagaatcagcgtcttgatgct
atggctaaactgaagcagtttcattgcagagtcctcatttccacagatttgacttctcgt
gggattgatgctgagaaggtgaatctggttgtaaatctggatgtaccattggattgggag
acatacatgcatcggattgggagagctggccgttttggtacattggggctgacagtgacc
tactgttgccggggagaggaagaaaatatgatgatgagaattgcccagaaatgtaatatc
aaccttctccctttaccagatcccattccttctggtctgatggaagaatgtgtggattgg
gatgtggaggttaaagctgctgtgcatacatatggcatagcaagtgtacctaaccaaccc
ctaaaaaagcaaattcagaaaatagagagaacccttcaaattcagaaagctcatggtgat
cacatggcttcctctagaaataattctgtatctggactatcagtcaaatcaaaaaataat
accaaacaaaagcttcctgtgaaaagccactcagaatgtggaatcatagaaaaagcagcg
tcaccaaaagaactgggctgtgacaggcaatccgaagagcaaatgaagaattctgttcag
actcctgttgaaaagtccaccaacagtcagcaccaggtcaaagaagctttacctgtgtca
ctcccccagattccttgtctgtcttcctttaaaatccatcagccatacacgttgactttt
gctgaattggtagaggattatgaacattatattaaagaggggttagagaaatctgtggaa
atcattaggcactacacaggtcctggggatcagactgtgaatcctcaaaatggttttgtg
agaaataaagttactgaacagagagtccctgtattggcaagtagtagccaatctggagac
tctgagagtgacagtgattcttacagctcaagaacctcttcccagagcaaaggaaataag
tcatacttggaaggctcttctgataatcagctgaaagactctgaatctactcctgtggat
gatcatatttctttggaacaaccaccaaatggaattgacacccccaatccagaggaatat
caagaatcacctggaatccagatcaagacaagacataaagagggggctagccagagagct
aagcagagccggagaaacctacccaggcggtcttccttcagattgcagactgaagcccag
gaagatgattggtatgactgtcatagggaaacacatctgagtttttctgatacctatcag
gattatgaggagtactggagagcttactacagggcatggcaagaatattatgctgccgct
tctcattcatattattggaatgctcagagacatccaagttggatggcagcttatcacatg
aataccatttatctacaagaaatgatgcatggtaaccagtga
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