Pongo abelii (Sumatran orangutan): 100432417
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Entry
100432417 CDS
T01416
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X2
KO
K06225
patched 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04024
cAMP signaling pathway
pon04340
Hedgehog signaling pathway
pon04360
Axon guidance
pon05200
Pathways in cancer
pon05205
Proteoglycans in cancer
pon05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100432417 (PTCH1)
04024 cAMP signaling pathway
100432417 (PTCH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100432417 (PTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100432417 (PTCH1)
05205 Proteoglycans in cancer
100432417 (PTCH1)
09162 Cancer: specific types
05217 Basal cell carcinoma
100432417 (PTCH1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
100432417
NCBI-ProteinID:
XP_024108524
Ensembl:
ENSPPYG00000019409
UniProt:
H2PSS7
LinkDB
All DBs
Position
13:complement(86574923..86639353)
Genome browser
AA seq
1431 aa
AA seq
DB search
MASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRDYLHRPSYCDAAF
ALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAAN
LETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANILTTEALLQHLD
SALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAK
LQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPA
DPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLISAHAL
QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVL
SFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALS
VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC
LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL
YRREDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQS
TVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSL
HCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDI
VPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQL
PKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDIS
QLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETR
LRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQ
YIGLRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSA
VPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLML
AGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEP
PPSVVRFAMPPGHMHSGSDSSDSEYSSQTTVSGLSEELRHYEAQQAAGGPAHQVIVEATE
NPVFAHSTVVHPESRHHPPSNPRQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNR
DRWGPRGARSHNPRNPASTAMGSSMPGYCQPITTVTASASVTVAVHPPPVPGPGRNPRGG
LCPGYPETDHGLFEDPHVPFHVRRERRDSKVEVIELQDVECEERPRGSNSN
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctggtaacgccgccgagccccaggaccgcggcggcggcggcagcggctgt
atcggtgccccgggccggccggctggaggcgggaggcgcagacggacgggggggctgcgc
cgtgctgccgcgccggaccgggactatctgcaccggcccagctactgcgacgccgccttc
gctctggagcagatttccaaggggaaggctactggccggaaagcgccgctgtggctgaga
gcgaagtttcagagactcttatttaaactgggttgttacattcaaaaaaactgcggcaag
ttcttggttgtgggcctcctcatatttggggccttcgcggtgggattaaaggcagcgaac
ctcgagaccaacgtggaggagctgtgggtggaagttggaggacgagtaagtcgtgaatta
aattatactcgccagaagattggagaagaggctatgtttaatcctcaactcatgatacag
acccctaaagaagaaggtgctaacatcctgaccacagaagccctcctacaacacctggac
tcggcactccaggccagccgtgtccacgtatacatgtacaacaggcagtggaaattggaa
catttgtgttacaaatcaggagagcttatcacagaaacaggttacatggatcagataata
gaatatctttacccttgtttgattattacacctttggactgcttctgggaaggggcgaaa
ttacagtctgggacagcatacctcctaggtaaacctcctttgcggtggacaaacttcgac
cctttggaattcctagaagagttaaagaaaataaactatcaagtggacagctgggaggaa
atgctgaataaggctgaggttggtcatggttacatggaccgcccctgcctcaatccggcc
gatccagactgccccgccacagcccccaacaaaaattcaaccaaacctcttgatatggcc
cttgttttgaatggtggatgtcatggcttatccagaaagtatatgcactggcaggaggag
ttgattgtgggtggcacagtcaagaacagcactggaaaactcatcagcgcccacgccctg
cagaccatgttccagttaatgactcccaagcaaatgtacgagcacttcaaggggtacgag
tatgtctcacacatcaactggaacgaggacaaggcggcagccatcctggaggcctggcag
aggacatatgtggaggtagttcatcagagtgtcgcacagaactccactcaaaaggtgctt
tccttcaccaccacgaccctggacgacatcctgaaatccttctctgacgtcagtgtcatc
cgcgtggccagcggctacttactcatgctcgcctatgcctgtctaaccatgctgcgctgg
gactgctccaagtcccagggtgccgtggggctggctggcgtcctgctggttgcactgtca
gtggctgcaggactgggcctgtgctcattgatcggaatttcctttaacgctgcaacaact
caggttttgccatttctcgctcttggtgttggtgtggatgatgtttttcttctggcccat
gccttcagtgaaaccggacagaataaaagaatcccttttgaggacaggaccggggagtgc
ctgaagcgcacaggagccagcgtggccctcacgtccatcagcaatgtcacagccttcttc
atggccgcgttaatcccaattcctgctctgcgggccttctccctccaggcagcggtagta
gtggtgttcaattttgccatggttctgctcatttttcctgcaattctcagcatggattta
tatcgacgcgaggacaggagactggatattttctgctgttttacaagcccctgcgtcagc
agagtgattcaggttgaacctcaggcctacaccgacacacatgacaatacccgctacagc
cccccacccccctacagcagccacagctttgcccacgaaacgcagattactatgcagtcc
actgtccagctccgcacagagtacgacccccacacacacgtgtactacaccactgccgag
ccgcgctccgagatctccgtgcagcccgtcaccgtgacacaggacaccctcagctgccag
agcccggagagcaccagctccacaagggacctgctctcccagttctccgactccagcctc
cactgcctcgagcccccctgtaccaagtggacactctcatcttttgctgagaagcactat
gctcctttcctcttaaaaccaaaagccaaggtagtggtgatcttcctttttctgggcttg
ctgggggtcagcctttatgggaccacccgagtgagagacgggctggaccttacggacatt
gtacctcgggaaaccagagaatatgactttattgctgcacaattcaaatacttttctttc
tacaacatgtatatagtcacccagaaagcagactacccgaatatccagcacttactttac
gacctacacaggagtttcagtaacgtgaagtatgtcatgttggaagaaaacaaacagctt
cccaaaatgtggctgcactacttcagagactggcttcagggacttcaggatgcatttgac
agtgactgggaaaccgggaaaatcatgccaaacaattacaagaatggatcagacgatgga
gtccttgcctacaaactcctggtgcaaaccggcagccgcgataagcccatcgacatcagc
cagttgactaaacagcgtctggtggatgcagatggcatcattaatcccagtgctttctac
atctacctgacggcttgggtcagcaacgaccccgtcgcatatgctgcctcccaggccaac
atccggccacaccgaccggaatgggtccacgacaaagccgactacatgcctgaaacaagg
ctgagaatcccggcagcagagcccatcgagtatgcccagttccctttctacctcaacggc
ttgcgggacacctcagactttgtggaggcgattgaaaaagtaaggaccatctgcagcaac
tatacaagcctggggctgtccagttaccccaacggctaccccttcctcttctgggagcag
tacatcggcctccgccactggctgctgctgttcatcagtgtggtgttggcctgcacattc
ctcgtgtgcgctgtcttccttctgaacccctggacggccgggatcattgtggtggtcctg
gcgctgatgacggtcgagctcttcggcatgatgggcctcatcggaatcaagctcagcgcc
gtgcccgtggtcatcctgatcgcttctgttggcataggagtggaattcaccgttcacgtt
gctttggcctttctgacggccatcggcgacaagaaccgcagggctgtgcttgccctggag
catatgtttgcacccgtcctggacggcgctgtgtccactctgctgggagtgctgatgctt
gcgggatctgagttcgacttcattgtcaggtatttctttgctgtgctggcgatcctcacc
atcctcggcgttctcaatgggctggttttgcttcccgtgcttttgtctttctttggacca
tatcctgaggtgtctccagccaacggcttgaaccgcctgcccacaccctcccctgagcca
ccccccagcgtggtccggttcgccatgccgcccggccacatgcacagcgggtctgattcc
tccgactcagagtatagctcccagacgacagtgtcaggcctcagcgaggagcttcggcac
tatgaggcccagcaggccgcgggaggccctgcccaccaagtgatcgtggaagccacagaa
aaccccgtcttcgcccactccactgtggtccatcccgaatccaggcatcacccaccctcg
aacccgcgacagcagccccgcagggacccccccagagaaggcttgtggccacccccctac
agaccgcgcagagacgcttttgaaatttctactgaagggcattctggccctagcaatagg
gaccgctggggcccccgtggggcccgttctcacaaccctcggaacccagcgtccactgcc
atgggcagctccatgcccggctactgccagcccatcaccactgtgacagcttctgcctcc
gtgactgtcgccgtgcacccgccgcctgtccctgggcctgggcggaacccccgagggggg
ctctgcccgggctaccctgagactgaccacggcctgttcgaggacccccacgtgcctttc
cacgtccggcgtgagaggagggattcaaaggtggaagtcattgagctgcaggacgtggaa
tgcgaggagaggccccggggaagcaactccaactga
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