Pongo abelii (Sumatran orangutan): 100432978 Help Entry 100432978         CDS       T01416                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism pon  Pongo abelii (Sumatran orangutan) Pathway pon03030   DNA replication pon03410   Base excision repair pon03420   Nucleotide excision repair pon03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pon00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     100432978 (LIG1)    03410 Base excision repair     100432978 (LIG1)    03420 Nucleotide excision repair     100432978 (LIG1)    03430 Mismatch repair     100432978 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pon03032]     100432978 (LIG1)    03400 DNA repair and recombination proteins [BR:pon03400]     100432978 (LIG1) Enzymes [BR:pon01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      100432978 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      100432978 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      100432978 (LIG1) DNA replication proteins [BR:pon03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     100432978 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      100432978 (LIG1) DNA repair and recombination proteins [BR:pon03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      100432978 (LIG1)    NER (nucleotide excision repair)     Other NER factors      100432978 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      100432978 (LIG1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase PucR Presenilin DUF1685 DDR Motif Other DBs NCBI-GeneID:  100432978 NCBI-ProteinID:  XP_024092288 Ensembl:  ENSPPYG00000010188 LinkDB All DBs Position 20:complement(54234586..54288780) Genome browser AA seq 919 aa AA seqDB search MQRSIMSFFHPKKEGKVKKPEKEASNSSRETEPPPKAALKEWNGVVSESDSPVKRPGRKA AQVLGSEGEEEDEALSPAKGQKPAPDCSQVSPPCPATSPENNASLSDTPPMDSSPSGIPK RRTARKQLPKRTIQEVLEEQSEDEDRDAKRKKEEKEAETTKESLTEAEVATEKEGEDGDQ PTTPPKPLKTSKAETPTESVSEPEVATKQELQEEEEQTKPPPRAPKTLSSFFTPRKPAIK KEVKEEKPGAPGKEGTAEGPLDPCGYNPAKNNYHPLEDACWKPGQKVPYLAVARTFEKIE EVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ ATGRHLESVRAEAAEKGDMGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSAST AKKIDIIKGLFVACHHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAV VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPL KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD IISRIPKIKLPSVTSFILDTEAVAWDHEKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAF DLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCE GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLL ASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAMIPDHWLDPSA VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ SQIQNQQGEDSGSDPEDTY NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgcagcggagtatcatgtcatttttccaccccaagaaagagggtaaagtgaagaagcct gagaaggaggcatccaacagcagcagagagacggagccgcctccaaaggcggcactgaag gagtggaatggagtggtgtccgagagtgactctccagtgaagaggccagggaggaaggcg gcccaggtcctgggcagcgaaggggaagaggaggatgaagcccttagccctgctaaaggc cagaagcctgccccagactgctcacaggtctccccgccctgtcctgccacatctcctgaa aacaacgcttccctctctgacacccctcccatggacagttccccatcagggatcccgaag cgtcgcacagctcggaagcagctcccgaaacggaccattcaggaagtcctggaagagcag agtgaggacgaggacagagacgccaagaggaagaaggaggagaaagaagcagagaccacg aaagaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacggggaccag cccaccacgcctcccaagcccctgaagacctccaaagcagagaccccgacggaaagcgtt tcagagcctgaggtggccacaaagcaggaactgcaggaggaggaggagcagaccaagcct cccccgagagctcccaagacgctcagcagcttcttcaccccccggaagccagcaatcaaa aaagaagtgaaggaagagaagccgggggctccaggaaaggagggaactgctgagggaccc ttggacccatgcggttacaatcctgccaagaacaactatcatcccttggaagatgcctgc tggaaaccgggccagaaggtcccttacctggccgtggcccggacgtttgagaagatcgag gaggtgtctgctcggctccggatggtggagacgctgagcaacttgctgcgctccgtggtg gccctgtcgcctccagacctcctccctgtcctctacctcagcctcaaccaccttgggcca ccccagcagggcctggagcttggcgtgggtgatggcgtccttctcaaggcggtggcccag gccacaggtcggcatctggagtccgtccgggctgaggcagccgagaaaggcgacatgggg cttgtggccgagaatagccgcagcacccagaggctcatgctgccaccacctccgctcact gcctccggggtcttcagcaagttccgcgacatcgccaggctcaccggcagtgcttccaca gccaagaagatagacatcatcaaaggcctctttgtggcctgccaccactcagaagcccgg ttcatcgccaggtccctgagcggacggctgcgccttgggctggcagagcagtcggtgctg gccgccctctcccaagccgtgagcctcacgcccccaggccaagaattcccaccagccgtg gtggatgctgggaagggcaagacagcagaggcccgaaagacttggctggaggagcaaggc atgatcctaaagcagacattctgcgaggttcccgacctggaccgaattatccccgtgctg ctggagcacggcctggaacgtctcccggagcactgcaagctgagtccagggattcccctg aaaccaatgttggcccatcccacgcggggcgtcagcgaggtcctgaaacgctttgaggag gcagctttcacctgtgaatacaaatatgatgggcagagggcacagatccacgccctggaa ggcggggaggtgaagatcttcagcaggaatcaggaagacaacactgggaagtacccggac atcatcagccgcatccccaagattaaacttccatcggtcacatcctttatcctggacacc gaagctgtggcttgggaccatgaaaagaagcagatccagccattccaagtgctcaccacc cgcaaacgcaaggaggtggatgcgtcggagatccaggtgcaggtgtgtttgtacgccttc gacctcatctacctcaatggagagtccctggtacgtgagcccctttcccggcgccggcag ctgctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctccctggac accaaggacgtcgagcagatcgctgagttcctggagcagtcggtgaaagactcctgcgag gggctgatggtgaagaccctggatgttgatgccacctacgagattgccaagagatcgcac aactggctcaagctgaagaaggactaccttgatggcgtgggtgacaccctggacctggtg gtgatcggcgcctacctgggccgggggaagcgggccggccggtacgggggcttcctgttg gcctcctacgacgaggacagtgaggagctgcaggccatatgcaagcttggaactggcttc agcgacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagccca cgcccttacgtgcggatagatggtgctatgattcccgaccactggctggaccccagcgcc gtgtgggaggtgaagtgtgctgacctctccctctcccccatctaccctgctgcgcggggc ctggtggatagtgacaaggggatctcccttcgcttccctcggtttattcgagtccgtgaa gacaagcagccggagcaggccaccaccagtgcccaggtggcctgtttgtaccggaagcaa agtcagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactaa

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