Pongo abelii (Sumatran orangutan): 100434818
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Entry
100434818 CDS
T01416
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100434818 (PDZRN4)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100434818 (PDZRN4)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100434818 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
Sina_ZnF
zf-C3HC4_4
zf-rbx1
PDZ_Tricorn
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100434818
NCBI-ProteinID:
XP_002823151
Ensembl:
ENSPPYG00000004418
LinkDB
All DBs
Position
10:38789837..39181810
Genome browser
AA seq
1036 aa
AA seq
DB search
MGFALERFAEAVDPALECKLCGQVFEEPLCTPCGHVFCASCLLPWAVRRRRCPLQCQPLA
PGELYRVLPLRSLIQKLRVQCDYQARGCGHSVRLHELEAHVEHCDFGPAGRLRSRRGCAS
GLGGGEVHARGGCSPAPRAGRGGGARGGLPGGRCGRGRGPVPRILDWRRREKALLAQLWA
LQGEVQLTARRYQEKFTQYMAYVRNFVGDLGGGHRRDGEHKPFTIVLERENDTLGFNIVG
GRPNQNNQEGTSTEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAFR
NAKEPIVVQVLRRTPLSRPAYGMAPEVQLMNASTQTDITFEHIMALAKLQPPTPPVPDIC
PFLLSDSCHSLHPMEHEFYEDNEYISSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCY
RTDDEEDTGIYVSEVDPNSIAAKDGRIRQGDRILQINGEDVQNREEAVALLSNDECKRIV
LLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTD
TATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVEL
QYNESLVSGEYIDSDCIGNQDEDCERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQE
GVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGK
LDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAATQ
SSSGQSSKELTSTKAKTTEQGCSAESKEKILEGSKLPDQEKAVSEHIPYLSPYHSSSYRY
ANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRY
ITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRR
EFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKS
PDGTRVHNAFLSVTTV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgcagaagccgtggacccggctctagagtgcaaactg
tgcggccaggtgtttgaagagcccctgtgcacgccgtgcgggcacgtcttctgcgccagc
tgcctgctgccctgggcggtgcggcggcgccggtgcccgctgcagtgccagcccttggcg
cccggcgagctgtaccgggtgctgccgctgcgcagcctcatccagaagctgcgcgtccag
tgcgactaccaggcccgcggctgcggccactcggtcaggctgcacgagctggaggcgcac
gtcgagcactgcgacttcggccctgccggccgcctccgcagccgccggggctgcgcttcg
gggctgggcggtggggaggtgcacgcgcgggggggctgcagtccggcacccagggctggc
cggggcgggggcgcgcgcggggggctgccgggcggccgctgtggccgcgggcggggacct
gtgcctcggatcctcgactggaggcggcgcgagaaggcgctgctggcgcagctctgggcg
ctgcagggcgaggtgcagctcacggcgcgcaggtaccaggagaagttcacccaatacatg
gcttacgtccgcaacttcgtcggcgacctgggtggcggccaccgcagggatggagaacat
aagccattcactattgtgttagaaagagaaaatgacactttgggattcaatattgtagga
ggtcgaccaaatcagaataatcaggaaggaacatcgactgaaggaatttatgtttcaaaa
attttagaaaatggacctgctgacagagcagatggcctggaaattcatgacaaaatcatt
gaggtcaatgggaaggatctttcgaaggccacccatgaagaggcagtggaagcttttcgc
aatgctaaggagcccattgtggtgcaggtgttaaggcgaacacctcttagtagaccagcc
tatgggatggctccagaagtgcagctcatgaatgccagcactcagacggacatcaccttc
gaacacatcatggctctggccaagcttcagccacctacccctccagtgccagacatctgt
ccattcctgctctcagacagctgccattctctgcatccaatggagcatgaattttatgag
gacaatgagtatatttccagcttgcctgctgatgcagacagaacagaagactttgaatat
gaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggcctgacagtctgttac
cgaacagatgatgaagaagacaccggcatttatgtcagcgaggttgacccaaatagcatt
gctgccaaagatggccggattcgacaaggggatcggattttgcaaataaatggggaagat
gtccagaatcgagaagaagcagtggccttgctgtctaacgatgagtgtaagagaatcgtg
ctgcttgttgcaaggccagagattcagctggatgaaggctggctggaagatgaaaggaat
gaattcttagaggagttaaacttggagatgttggaagaagagcataatgaagcaatgcag
cccactgccaatgaggtggagcagccaaaaaagcaagaagaagaagaaggcacaacagac
actgcaacatcctcatccaacaaccatgagaaggacagtggagtaggacgtaccgatgaa
agcttgcgaaatgatgagagctcagagcaggagaatgcagctgaggaccccaatagcaca
tctttgaagagcaagagagacctggggcagagccaagacactctaggaagtgttgaactt
cagtacaatgagagtctcgtgtctggtgaatacattgactcagactgcattggcaaccaa
gatgaggactgtgaaagattcaggcagctcttggagctcaaatgcaagattcgaaatcat
ggagagtatgacctgtattactcaagcagcacaattgaatgcaatcaaggggagcaagag
ggagtggagcatgagctacagttgcttaatgaagagctgagaaacattgagcttgagtgt
cagaatatcatgcaggctcacaggctccagaaagtgacagaccagtatggagacatctgg
acattgcatgatggaggattccggaattataacaccagcatagatatgcaaaggggaaag
ctagatgacatcatggagcatccagaaaagtctgacaaggacagttctagtgcttacaac
acagctgagagctgcagaagtactccgctcactgtagaccgttcccctgacagttctctt
ccaaggatgatcaatctcaccaataagaaaaacctgagaagcacaatggcagccacccag
tcctcttccggacaaagcagtaaagagttgacctccaccaaagccaaaaccactgagcaa
ggttgtagcgctgaaagcaaggagaagattttagaaggcagcaagcttcctgatcaagag
aaggcagtcagtgaacacatcccttacctctctccttaccacagctcctcatatagatat
gcaaacatcccagcacatgcccggcattatcaaagctacatgcagttaattcaacagaaa
tctgcagtcgagtatgctcagagtcagctcagcttggtgagcatgtgcaaggagtctcag
aagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgacgggacacggtac
atcacaaagagacccgtgcgagaccgcatcctgaaggaacgtgccttaaagatcaaggaa
gagcggagtggcatgaccacagacgatgacaccatgagcgagatgaaaatggggcgctac
tggagcaaagaggagagaaagcagcacctggttagggccaaagagcagcgccgtcgccgt
gagttcatgatgcgaagccggttagagtgtctcaaggagagccctcagagcggcagtgag
ggcaagaaggagatcaatatcattgaactgagtcacaaaaagatgatgaaaaagagaaac
aagaaaattttggacaactggatgacaatacaagagctgatgacccatggggccaagtct
cccgatggcacgagagtccataatgccttcttgtcggtgaccacagtatga
DBGET
integrated database retrieval system
