Pongo abelii (Sumatran orangutan): 100435607
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Entry
100435607 CDS
T01416
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100435607 (TDRD12)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
100435607 (TDRD12)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100435607 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100435607
NCBI-ProteinID:
XP_054394813
Ensembl:
ENSPPYG00000009821
LinkDB
All DBs
Position
20:38015092..38135667
Genome browser
AA seq
1326 aa
AA seq
DB search
MLQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYSSTCQDIEIKPLTLEEG
QVCVVYCEELKCWCRAIVKSIMSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY
RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDSAAIQYFQNLLKATTQVEARLCAVEED
TFEVYLYVTIKDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEKPRLNIKSAPSFNKLNPA
LTLWPMFLQGKDVQGMEDSHGLNFPAQSLQHTWCKGIVSDLRPTATAPDKAVKCNMDSLR
DSPKNKSEKKHHCISLKDTNKRVESSAYWPAKRGITIYADPDVPEASALSQKSNEKPLRL
AEKKEYNEKNSCVKLLQFLNPDPLRADGISDLQQLQKLKGLQPPMAVLRNKIEPCLTIGS
SPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCESNPLLYLLPVLTILQTG
ACYKSLPSRNGPLAVIVCPGWKKAQFIFELLGEYSMSSRPLHPVLLTIGLHKEEAKNTKL
PRGCDVIVTTPYSLLRLLACQSLLFLRLCHLILDEVEVLFLEANEQMFAILDNFKKNIEV
EERESAPHQIVAVGVHWNKHIEHLIKEFMNDPYIVITAMEEAALYGNVQQVVHLCLECEK
TSTLLQALDFIPSQAQKTLIFTCSVAETEIVCKVVESNSIFCLKMHKEMIFNLQNVLEQW
KKLSSGSQIILALTDDCVPLLAITDATCVIHFSFPASPKVFGGRLYCMSDHFHAEQGSPA
EQGDKKAKSVLLLTEKDASHAVGVLRYLERADAKVPAELYEFTAGVLEAKEDKKAGRLLC
PYLKAFGFCKDKRICPDRHRVNPEMDMPRKLSSQALPSFGYIKIIPFYILNATNYFGRMV
DKHMDLYATLNAEMNEYFKDSNKTTVEKVEKFGLYGLAEKTLFHRVQVLEVSQKEDAWAL
DDILVEFIDEGRTGLVTRDQLLHLPEHFHALPPQAVEFIVCRVKPADNEMEWNPKVTRYI
HHKIVGKLHDAKVILALGNTVWIDPMVHITNLSNLKTSVIDYNVRAEILSMGMGIDNPEH
IEQLKKLREDAKIPAFEESLSQTPPRVTGTRPAQGQDRPSEEQEGQGTPPPAEDTACLQS
PQPEDTGTEGGAESKMSSENQKPETLSGNTEVAFISRTAQPPLKSFHPQIKWFQKEDVVI
LQIRIRNVKDYKCQYLRDRVIFSTWVGDKFYLADLELRGNIRKDDCKCVIRNDEPVITLA
KERREAWCHLLRQRNPNVAFDFDHWEDCEEDSHFPKVVNSKNLPYTVTEVVEDSSSTSED
DDSESE
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcctggtgctgaagattgaagatccaggttgcttctgggttattataaaa
gggtgtagtccctttttagatcatgatgtcgactatcaaaaattaaatagtgccatgaat
gacttctacagcagcacgtgtcaagatatagaaataaaaccattaacattggaagaagga
caggtgtgtgtggtctattgtgaggagctaaagtgctggtgcagggccattgtcaaatca
attatgtcttccgcagaccagtacctggcagaatgtttccttgtggactttgccaagaac
attccagtcaaatctaaaaacatccgagttgtagtagaatcatttatgcagcttccctat
agagcaaaaaaattcagcctgtactgcacaaagcctgtcacattacacattgacttctgc
cgagacagtactgacattgtacctgccaagaagtgggacagtgcagctattcagtacttt
cagaaccttctgaaagcaactacccaggtagaagccagattatgtgctgtggaagaagat
acatttgaggtttacctttatgtaactataaaagatgaaaaagtttgtgttaatgatgat
cttgttgcaaagaactatgcttgttatatgtcacctacaaagaataaaaaccttgattat
ttagaaaaaccaagattgaatataaaatcagcaccctccttcaataaactcaatccagca
cttacactctggccaatgtttttgcaaggaaaagatgttcaaggaatggaagattcacat
ggtttaaattttccggcacaatctctgcagcatacatggtgcaagggtattgtcagtgac
ctcaggccaacagccacagcaccggacaaagctgtaaaatgtaatatggattcattgaga
gattcacctaaaaacaaatctgaaaagaagcaccattgcatctctttaaaagatacaaat
aagcgtgttgaatcctcagcttactggccagcaaaaagaggcataaccatatatgctgat
ccagatgtaccagaagcaagtgctttaagtcagaagtcaaatgagaaacctcttagattg
gctgagaagaaagaatataatgagaagaatagctgtgtgaaattactgcagtttttaaat
cctgatcctttgagagctgacggaatctctgatctccagcagttgcagaagctgaagggc
ctgcagccgcccatggcagtgctccggaacaagatcgagccctgcttaaccattggctcg
tcgccgctgtcagcagacctgaagaaggctcttcaaagaaataagtttccgggccccagc
cacactgaatcttactcttggcctcccatagcgcgtggctgtgatgtggttgtcatttct
cattgtgaaagcaaccctttgctctacctcctaccagtgttgacaattttgcaaacagga
gcctgctataagtcattaccaagtagaaatggacctctcgcagtcattgtgtgccctggg
tggaagaaggcccaatttatttttgaattattgggagaatatagcatgtcctccaggcct
cttcatcctgtgctattaacaattgggctccataaagaggaagccaaaaatacaaagctt
ccaaggggctgtgatgtgattgttacgaccccatacagcctgctgaggcttctcgcctgt
cagagcctgctgttcctcaggctctgccacctgatcctggatgaggtagaggtgctattc
ttggaagccaatgaacagatgtttgctatattagataactttaaaaaaaatattgaagtt
gaagaaagggaatctgcaccacatcagattgttgcagttggagttcattggaacaaacat
atagaacatctcatcaaagagttcatgaatgatccctacattgtgatcacagccatggaa
gaggctgctctctatggcaatgtccaacaggtagtacatctttgcctagaatgtgaaaaa
acttctactttactccaagctcttgattttattccaagtcaggcacaaaagaccttgatc
ttcacctgctctgtagctgaaacagaaatagtgtgtaaggtagtagaaagcaattcaata
ttttgcttgaagatgcataaagaaatgatttttaacttacaaaatgttttagaacagtgg
aagaagttaagttctggctctcaaattatattagccctcacagacgactgcgtcccactc
ttggccatcaccgatgccacgtgtgtgattcacttcagcttccctgcctcgccaaaagtt
tttggtggacgcctgtattgcatgtctgatcattttcacgctgaacagggttctcctgca
gaacagggagataagaaagccaaatctgtcttgctgctgacggagaaagatgcgagtcac
gcggtgggtgtcctgcgctacttggagcgagcggacgccaaggtccccgcagagctgtac
gagttcaccgcaggagttctggaagccaaagaagataagaaagccggaaggcttctttgt
ccatatctgaaggcttttggtttttgcaaagacaaaaggatctgtcctgaccgacaccgt
gttaatccagaaatggacatgcccaggaaactgtccagccaagcccttccttcatttgga
tacattaaaataatacctttttatattttgaatgcaacaaattactttggccgtatggtt
gataaacacatggatctttatgcaactctcaatgctgaaatgaatgagtattttaaggat
tctaataaaacaactgtggaaaaggtggagaagtttggattgtatggattagcagaaaaa
acgctttttcacagggttcaggtgttggaagtgagccaaaaagaagacgcctgggccctg
gatgacatccttgtagagttcatcgacgaaggcaggacggggctcgtcacaagggaccag
ctgctgcatctcccagaacatttccacgcgcttcccccacaggctgtggagtttattgtc
tgtagggtgaaacctgctgacaacgaaatggaatggaatccgaaggttactaggtacatt
catcataaaattgttggaaaattgcatgatgcaaaagtgatcctggctttgggaaataca
gtttggattgatccaatggtgcacattacaaacctttccaatttaaaaacctctgtcatt
gattataatgttcgagctgaaattttgtctatgggcatgggcattgataatccagaacac
atagagcaactgaaaaaattacgtgaagatgctaagataccagcttttgaagaaagccta
agccagaccccgccgagggtgacagggaccaggcctgctcaaggccaggatcgtccatcc
gaggagcaggaagggcaggggacacctcctccagcagaagatactgcttgcctgcagagc
ccccagcctgaggacacgggtacagaaggaggggctgagtccaagatgagctcagaaaac
cagaagcctgaaactttatctggaaacactgaagttgccttcattagcagaactgcacag
ccgcctctgaaaagcttccacccacaaatcaaatggttccaaaaagaagatgtcgtcatc
ttacagataagaataaggaatgtaaaggactacaagtgtcagtatttaagggatagagtc
attttcagtacttgggtgggagacaaattttacctggctgatctggagctgcggggcaac
ataaggaaagatgactgcaaatgtgtgattagaaacgatgaacctgtaatcactctggcc
aaagagagaagggaggcatggtgtcacctactcagacagaggaaccccaacgtggctttt
gattttgatcactgggaagactgtgaagaggacagccacttccccaaggtagtgaattct
aaaaacctgccgtacacagtgacagaggtggttgaagacagtagcagcacttcagaggat
gacgacagtgagagtgaatga
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