Pongo abelii (Sumatran orangutan): 100435868
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Entry
100435868 CDS
T01416
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X4
KO
K14328
regulator of nonsense transcripts 3
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03013
Nucleocytoplasmic transport
pon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100435868 (UPF3B)
03015 mRNA surveillance pathway
100435868 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100435868 (UPF3B)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100435868 (UPF3B)
mRNA cycle factors
P-body specific factors
100435868 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100435868
NCBI-ProteinID:
XP_024096867
Ensembl:
ENSPPYG00000020675
LinkDB
All DBs
Position
X:complement(125594270..125618729)
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AA seq
470 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPAGATGSGGGTSGDSSKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRIPERDKLKDEPKIKLLKKPEKGDEKELDKREKAKKLDKETLSDER
ASGQSCTLPKRSDSELKDEKPKRPEDESGRDYREREREYERDQERILRERERLKRQEEER
RRQKERYEKEKTFKRKEEEMKKEKDTLRDKGKKAESTESIGSSEKTEKKEEVVKRDRIRN
KDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAAERKQESGISHRKEGGEE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaggagcaccggcctaaggagaagcgagtaaccctgttaacccccgcc
ggggccacaggcagcggtggtgggacctcgggggacagctccaagggggaagataagcag
gatcgcaacaaggagaagaaagaagcgctgagcaaggtggtaattcgaagattacctccc
actttgaccaaggagcagcttcaggaacatcttcaacctatgcctgagcatgattatttt
gagtttttttctaatgatacgagtttgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaataccctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagtcgggactatcgatgatgatccagaatat
agaaagtttttggaaagttatgccacagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaagagagaagaaagaaggagg
agagaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagaattccagaaagggac
aaattaaaggatgaaccaaagattaagctgctcaagaagccagaaaaaggagatgaaaaa
gaattggataaaagagaaaaagccaagaaattggacaaagagactctcagtgatgaaaga
gccagtgggcaaagttgtacattgcccaagcgttctgatagtgaacttaaagatgaaaaa
ccaaagagacctgaagatgagagcggcagagactacagggagagggaacgggaatatgaa
cgagatcaggagcgcatacttcgagaaagagagaggctgaagcggcaagaagaagagcgc
cgtaggcagaaggagcgctatgagaaagagaagacttttaagagaaaagaagaagaaatg
aaaaaagagaaagacacacttcgggataaaggaaagaaggctgaaagtacagaatcaata
ggcagctcagaaaaaactgaaaagaaagaagaagtggtcaagagagatcgaataagaaac
aaggatcgtccagcgatgcagctttaccaaccaggagctcgaagccgaaatcgactctgt
ccccctgatgacagcaccaagtctggagattcagcagcagaaaggaagcaggaaagtggt
attagccatagaaaagaaggaggagaggagtga
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