Pongo abelii (Sumatran orangutan): 100436053
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Entry
100436053 CDS
T01416
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X3
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04120
Ubiquitin mediated proteolysis
pon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100436053 (SYVN1)
04120 Ubiquitin mediated proteolysis
100436053 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100436053 (SYVN1)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100436053 (SYVN1)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100436053 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
100436053
NCBI-ProteinID:
XP_009244438
Ensembl:
ENSPPYG00000003075
UniProt:
A0A2J8TZ80
LinkDB
All DBs
Position
9:9553270..9559595
Genome browser
AA seq
617 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGA
ATTTAAGTSAAAASATASGPGSGSAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAG
FAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSV
SSAEETATTVVAAASSTSIPSSEATTPTPGASPPAPETERPPAPESVGTEEMPEDGEPDA
AELRRRRLQKLESPVAH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggcagtgatgatggcggccagcctggcgctgaccggggctgtggtggct
cacgcctactacctcaaacaccagttctaccccactgtggtgtacctgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttccttctgggcaaggtg
atgggcaaggtgttctttgggcaactgagggcagcagagatggagcaccttctggaacgt
tcttggtacgccgtcacagagacttgtctggccttcaccgtttttcgagatgacttcagc
ccccgctttgttgcactcttcactcttcttctcttcctcaaatgtttccactggctggct
gaggaccgtgtggactttatggaacgcagccccaacatctcctggctctttcactgccgc
attgtctctcttatgttcctcctgggcatcctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgtggggcttctgtgcagctggtgtttggttttgagtatgccatc
ctgatgacgatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agtgagaacccctgggacaacaaggctgtgtacatgctctacacagagctgtttacaggc
ttcatcaaggttctgctgtacatggccttcatgacaatcatgatcaaggtgcacaccttc
ccactcttcgccatccggcccatgtacctggccatgagacagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacaccctgtatccagatgccacc
ccagaggagctccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggatgtccttcgtgcatcactgccagcc
cagtcaccaccacccccggagcctgcggatcaggggccaccccctgccccccacccacca
ccactcttgcctcagccccccaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggccccccatgggcccctttccacctgtcccacctccccccagctca
ggagaggctgtggcccctccttccaccagtgcagcagccctttctcggcccagtggagca
gctacaaccacagctgctggcaccagtgctgctgctgcttctgccacagcatctggccca
ggctctggctctgccccagaggctggccctgcccctggtttccccttccctcctccctgg
atgggtatgcccctgcctccgccctttgccttccccccaatgcctgtgccacctgcgggc
tttgcggggctgaccccagaggagctacgagctctggagggccatgagcggcagcacctg
gaggcccggctgcagagcctgcgtaacatccacacactgctggacgccgccatgctgcag
atcaaccagtacctcaccgtgctggcctccttggggcctccccggcctgccacttcagtc
agctccgctgaggagactgccactacagttgttgctgctgcctcctccaccagcatccct
agctcagaggccacgaccccaaccccaggagcctccccaccagcccctgaaacggaaagg
cctccagctcctgagtcagtgggcacagaggagatgcccgaggatggagagcctgatgca
gcagagctccgccggcgccgcctgcagaagctggagtctcctgttgcccactga
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