KEGG   Pongo abelii (Sumatran orangutan): 100436053
Entry
100436053         CDS       T01416                                 
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X3
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04120  Ubiquitin mediated proteolysis
pon04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100436053 (SYVN1)
   04120 Ubiquitin mediated proteolysis
    100436053 (SYVN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pon04121]
    100436053 (SYVN1)
Enzymes [BR:pon01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100436053 (SYVN1)
Ubiquitin system [BR:pon04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100436053 (SYVN1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H zf-C3H2C3 zf-Nse Endonuclease_7 Prok-RING_4
Other DBs
NCBI-GeneID: 100436053
NCBI-ProteinID: XP_009244438
Ensembl: ENSPPYG00000003075
UniProt: A0A2J8TZ80
LinkDB
Position
9:9553270..9559595
AA seq 617 aa
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGA
ATTTAAGTSAAAASATASGPGSGSAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAG
FAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSV
SSAEETATTVVAAASSTSIPSSEATTPTPGASPPAPETERPPAPESVGTEEMPEDGEPDA
AELRRRRLQKLESPVAH
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgttccgcacggcagtgatgatggcggccagcctggcgctgaccggggctgtggtggct
cacgcctactacctcaaacaccagttctaccccactgtggtgtacctgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttccttctgggcaaggtg
atgggcaaggtgttctttgggcaactgagggcagcagagatggagcaccttctggaacgt
tcttggtacgccgtcacagagacttgtctggccttcaccgtttttcgagatgacttcagc
ccccgctttgttgcactcttcactcttcttctcttcctcaaatgtttccactggctggct
gaggaccgtgtggactttatggaacgcagccccaacatctcctggctctttcactgccgc
attgtctctcttatgttcctcctgggcatcctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgtggggcttctgtgcagctggtgtttggttttgagtatgccatc
ctgatgacgatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agtgagaacccctgggacaacaaggctgtgtacatgctctacacagagctgtttacaggc
ttcatcaaggttctgctgtacatggccttcatgacaatcatgatcaaggtgcacaccttc
ccactcttcgccatccggcccatgtacctggccatgagacagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacaccctgtatccagatgccacc
ccagaggagctccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggatgtccttcgtgcatcactgccagcc
cagtcaccaccacccccggagcctgcggatcaggggccaccccctgccccccacccacca
ccactcttgcctcagccccccaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggccccccatgggcccctttccacctgtcccacctccccccagctca
ggagaggctgtggcccctccttccaccagtgcagcagccctttctcggcccagtggagca
gctacaaccacagctgctggcaccagtgctgctgctgcttctgccacagcatctggccca
ggctctggctctgccccagaggctggccctgcccctggtttccccttccctcctccctgg
atgggtatgcccctgcctccgccctttgccttccccccaatgcctgtgccacctgcgggc
tttgcggggctgaccccagaggagctacgagctctggagggccatgagcggcagcacctg
gaggcccggctgcagagcctgcgtaacatccacacactgctggacgccgccatgctgcag
atcaaccagtacctcaccgtgctggcctccttggggcctccccggcctgccacttcagtc
agctccgctgaggagactgccactacagttgttgctgctgcctcctccaccagcatccct
agctcagaggccacgaccccaaccccaggagcctccccaccagcccctgaaacggaaagg
cctccagctcctgagtcagtgggcacagaggagatgcccgaggatggagagcctgatgca
gcagagctccgccggcgccgcctgcagaagctggagtctcctgttgcccactga

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