Pongo abelii (Sumatran orangutan): 100436364
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Entry
100436364 CDS
T01416
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03030
DNA replication
pon03410
Base excision repair
pon03420
Nucleotide excision repair
pon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100436364 (RFC4)
03410 Base excision repair
100436364 (RFC4)
03420 Nucleotide excision repair
100436364 (RFC4)
03430 Mismatch repair
100436364 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pon03032
]
100436364 (RFC4)
03036 Chromosome and associated proteins [BR:
pon03036
]
100436364 (RFC4)
03400 DNA repair and recombination proteins [BR:
pon03400
]
100436364 (RFC4)
DNA replication proteins [BR:
pon03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100436364 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
100436364 (RFC4)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100436364 (RFC4)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100436364 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
100436364 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
DUF815
AAA_16
AAA_30
AAA_22
AAA_11
AAA_24
Mg_chelatase
AAA_28
SLFN-g3_helicase
RuvB_N
Gp44_lid
AAA_19
AAA_5
ResIII
TIP49_C
Viral_helicase1
AAA_7
DUF6096
Motif
Other DBs
NCBI-GeneID:
100436364
NCBI-ProteinID:
XP_002814437
Ensembl:
ENSPPYG00000014385
UniProt:
A0A6D2W461
LinkDB
All DBs
Position
2:complement(196793831..196810375)
Genome browser
AA seq
363 aa
AA seq
DB search
MQAFLKGTSISTKPPLTKDRGVAATAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDVVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQLS
QNC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttcttaaaggcacatccatcagtactaaacccccgctgaccaaggatcga
ggagtagctgccactgcgggaagtagcggagagaacaagaaagccaaacccgttccctgg
gtggaaaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtggttgca
gtgctgaaaaagtctttagaaggagcagatcttcctaatctcttattttacggaccacct
ggaactggaaaaacatccactattttggcagcagctagagaactctttgggcctgaactt
ttccgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttcga
gagaaagtgaaaaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagccg
tgtccgccttttaagattgtgattctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaggagtctaaaaccacccgattctgtcttatctgt
aactatgtcagtcgaataattgaacccctgacctctagatgttcaaaattccgcttcaag
cctctgtcagataaaattcaacagcagcgattactagacattgccaagaaggaaaatgtc
aaaattagtgatgagggaatagcttatcttgttaaagtgtcagaaggagacttaagaaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggagatcacagagaaa
gtgattacagacattgctggggtaataccagctgagaaaattgatggagtatttgctgcc
tgtcagagtggctcttttgacaaactagaagctgtggtcaaggatttaattgatgagggt
catgcagcaactcagctcgtcaatcaactccatgatgtggttgtagaaaataacttatct
gataaacagaagtccattattacagaaaaacttgccgaggttgacaaatgcctagcagat
ggtgctgatgaacatttgcaactcatcagcctttgtgcaactgtgatgcagcaattatct
caaaattgttaa
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