Pongo abelii (Sumatran orangutan): 100436701
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Entry
100436701 CDS
T01416
Symbol
STRC
Name
(RefSeq) stereocilin
KO
K24636
stereocilin
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pon03037
]
100436701 (STRC)
Cilium and associated proteins [BR:
pon03037
]
Other cilia and associated proteins
Stereociliary proteins
100436701 (STRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
ALTTAQ_rpt
SRCR_2
Motif
Other DBs
NCBI-GeneID:
100436701
NCBI-ProteinID:
XP_054388711
Ensembl:
ENSPPYG00000006420
UniProt:
H2NN22
LinkDB
All DBs
Position
16:complement(46519329..46538677)
Genome browser
AA seq
1771 aa
AA seq
DB search
MALSLWPLLLLLLLLSLSFAVTVAPTGPHSLDPGLSFLKSLLSTLDQAPQGSLSRSRFST
FLANISSSFEPGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDMLALLG
QEQTPRDFLVHQAGVLGGLVEVLLGALVPGGPPTPTRPPCTRDGPSDCVLAADWLPSLLL
LLEGTRWQALVQVQPSVDPTNATGLDGREAAPHFLQGLLGLLTPTGELGSEEALWGGLLR
TVGAPLYAAFQERLRRVTHSLQDEVFSVLGQPEPDANGQCQGGNLQQLLLWGVRHNLSWD
VQALGFLSGSPPPPPALLHCLSTGVPLPRASQPSAHISPRQRRAITVEALCENHSGPAPP
YSISNFSIHLLCQHTKPATPQPPPSTTAICQTAVWYAVSWAPGAQGWLQACHDQFPDEFL
DAICSNLSFSALSGSNHRLVKRLCAGLLPPPTSCPEGLPPVPVTPDIFWGCFLENETLWT
ERLCGEASLQAVPPSNQAWVQHVCQGPTPDVTASPPCHIGPCGERCPDGGSFLVMVCAND
TMYEVLVPFWPWLAGQCRISRGGNDTCFLEGLLGPLLPSLPPLEPSPLCLTPGPFLLGML
SQLPRCRSSVPALAHHTRLHYLLRLLTFLLGPGAGGAEAQGMLGRALLLSSLPDNCSFWD
AFRPEGRRSVLRTIGEYLQQEEEQPTPSGFEPTVNPSSGIISKMELLACFSPVLWDLLQR
EKSIWALQILVQAYLHMPPENLQQLVLSAEREAAQGFLTLMLQGKLQVPPSEEQALGRLT
ALLLQRYPHLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVLAAIRDYSPGMRPEQKE
ALAKRLLAPELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALEDSWPAVGLGP
GHARHVLRSLVNQSVQDGEEQVRRLGPLACFLSPEELQSLVPLSDPTGPVERGLLECAAN
GTLSPEGRVAYELLGVLRSSGGAVLSPRELRVWAPLFPQLGLHFLQELSEPQLRAMLPVL
QGTSVTPAQAVLLLGRLLPRHDLSLEELCSLHLLLPGLSPQTLQAIPRRVLVGACSCLAP
ELSRLSACQTAALLQTFRVKDGVKNMGTTGAGPAVCIPGQPIPTTWPDCLLPLLPLKLLQ
LDSSALLANRRRYWELPWSEQQAQFLWKKMQVPTNLTLRNLQALGTLAGGMSCEFLQQIN
SMVDFLEVVHMIYQLPTRVRGSLRACIWAELQRRMAMPEPEWTTLGPELNGLDSKLLLDL
PIQLMDRLSNESIMLVVELVHRAPEQLLALTPLHQAALAERALQNLAPKETPVSGEVLET
LGPLVGFLGIESTRQIPLQILLSHLSQLQGFCLGETFTTELGWLLLQESVLGKPELWSQD
EVEQAGRLVFTLSTEAISLIPREALGPETLERLLEKQQSWEQSRVGQLCRGPQLAAKKAA
LVAGVVRPAAEDLPEPVPNCADVRGTFPAAWSATQIAEMELSDFEDCLTLFAGDPGLGPE
ELRAAMGKAKQLWGPPRGFRLEQILQLGRLLIGLGDRELQELILVDWGVLSTLGQIDGWS
STQLRIVVSSFLRQSGRHVSHLDFIHLTALGYTLCGLRPEELQHISSWEFSQAALFLGTL
HLQCSEEQLEVLAHLLVLPGGFGPVSNWGPEIFTEIGTIAAGIPDLALSALLRGQIQGIT
PLAISVIPPPKFAVVFSPTQLSSLTSAQAVAVTPEQMAFLSPEQRRAVAWAQHEGKESPE
QQGRSTAWGLQDWSRPSWSLVLTISFLGHLL
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagcctctggcccctgctgctgctgctgctgctgctgtcgctgtcctttgca
gtgactgtggcccctactgggcctcattccctggaccctggtctctccttcctgaagtca
ttgctctccactctggaccaggctccgcagggctccctgagccgctcacggttctctaca
ttcctggccaacatttcttcttcctttgagcctgggagaatgggggaaggaccagtagga
gagcccccacctctccagccgcctgctctccggctccatgattttctagtgacactgaga
ggcagccccgactgggagccaatgctaggcctgctaggggatatgctggcactgctggga
caggagcagactccccgagatttcctggtgcaccaggcaggggtgctgggtggacttgtg
gaggtgctgctgggcgccttagttcctgggggcccccctaccccaactcggcccccgtgc
acccgtgatgggccctctgactgtgtcctggctgctgactggttgccttctctgctgctg
ttgttagagggcacacgctggcaagctctggtgcaggtgcagcccagtgtggaccccacc
aatgccacaggcctcgatgggagggaggcagctcctcactttttgcagggtctgttgggt
ttgcttaccccaacaggggagctaggctccgaggaggctctttggggcggtctgctacgc
acagtgggggcccccctctatgctgcctttcaggagaggctgcgccgtgtcactcactcc
ctgcaggatgaggtcttttccgttctggggcagccagagcctgatgccaatgggcagtgc
cagggaggtaaccttcaacagctgctcttatggggcgtccggcacaacctttcctgggat
gtccaggcgctgggctttctgtctggatcaccacccccaccccctgccctccttcactgc
ctgagcacgggtgtgcctctgcccagagcttctcagccctcagcccacatcagcccacgc
caacggcgagccatcactgtggaggccctctgtgagaaccactcaggcccagcaccaccc
tacagcatttccaacttctccatccacttgctctgccagcacaccaagcctgccactcca
cagccccctcccagcaccactgccatctgccagacagctgtgtggtatgcagtgtcctgg
gcaccaggtgcccaaggctggctacaggcctgccatgaccagtttcctgatgagtttttg
gatgcgatctgcagtaacctctccttttcagccctgtctggctccaaccaccgcctggtg
aagcggctctgtgctggcctgctcccaccccctaccagctgccctgaaggcctgccccct
gttcccgtcaccccagacatcttttggggctgcttcttggagaatgagactctgtggact
gagcgactgtgtggggaggcaagtctacaggctgtgccccccagcaaccaggcttgggtc
cagcatgtgtgccagggtcccaccccagatgtcactgcctccccaccgtgccacattgga
ccctgtggggaacgctgcccagatgggggcagtttcctggtgatggtctgtgccaatgac
accatgtatgaggtcctggtgcccttctggccttggctagcaggccaatgcaggataagt
cgtgggggcaatgacacttgcttcctagaagggctgctgggcccccttctgccctctctg
ccaccactggaaccatccccactctgtctgacccctggccccttcctccttggcatgcta
tcccagttgccacgctgtcggtcctctgtcccagcgcttgctcaccacacacgcctacac
tatctcctccgcctgctgaccttcctcttgggtccaggggctgggggcgctgaggcccag
gggatgctgggtcgggccctactgctctccagtctcccagacaactgctccttctgggat
gcctttcgcccggagggccggcgcagtgtgctacgcacgattggggaatacctgcagcaa
gaggaggagcagccaaccccatcaggctttgaacccactgtcaaccccagctctggtatt
ataagcaagatggagctgctggcctgctttagtcctgtgctgtgggatctgctccagagg
gaaaagagtatttgggccctgcagattctagtgcaggcatacctgcatatgcccccagaa
aacctccagcagctggtgctttcagcagagagggaggctgcacagggcttcctgacactc
atgctgcagggtaagctgcaggtaccaccatccgaggagcaggccctgggtcgcctgaca
gccctgctgctccagcggtacccacacctcacctcccagctcttcattgacctgtcgcca
ctcatccctttcttggctgtctctgacttgatgcgcttcccaccatccctgttagccaac
gacagtgtcctggctgccatccgggattacagcccaggaatgaggcctgaacagaaggag
gctctggcaaagcgactgctggcccctgaactgtttggggaagtgcctgcctggccccag
gagctgctgtgggcagtgctgcccctgctcccccacctccctctggagaactttctgcag
ctcagccctcaccagatccaggccctggaggatagctggccagcagtaggtctggggcca
gggcatgcccgccatgtgctgcgcagcctggtaaaccagagtgtccaggatggtgaggag
caggtacgcaggcttgggcccctcgcctgtttcctgagccctgaggagctgcagagccta
gtgcccctgagtgatccaacggggccggtagaacgggggttgctggaatgtgcagccaac
gggaccctcagcccagaaggacgggtggcatatgaacttctgggtgtgttgcgctcatct
ggaggagcagtgctgagcccccgggagctgcgggtctgggcccctctcttccctcagctg
ggcctccacttcctgcaggagctgtcagagccccagcttagagccatgcttcctgtcctg
cagggaactagtgttacacctgctcaggctgtcctgctgcttggacggctccttcctagg
cacgatctatccctggaggaactctgctccttgcaccttctgctaccaggcctcagcccc
cagacactccaggccatccctaggcgagtcctggtcggggcttgttcctgcctggcccct
gaactgtcacgcctctcagcctgccagaccgcagcactgctgcagacctttcgggttaaa
gatggtgttaaaaatatgggtacaacaggtgctggtccagctgtgtgtatccctggtcag
cctattcccaccacctggccagactgcctgcttcccctgctcccattaaagctgttacaa
ctggattcctcggctcttctggcaaatcgaagacgctactgggagctgccctggtctgag
cagcaggcacagtttctctggaagaagatgcaagtacccaccaacctgaccctcaggaat
ctgcaggctctgggcaccctggcaggaggcatgtcctgtgagtttctgcagcagatcaac
tccatggtagacttccttgaagtggtgcacatgatctatcaactgcccaccagagttcga
gggagcctgagggcctgtatctgggcagagctacagcgtaggatggcaatgccagaacca
gaatggacaactctagggccagaactgaatgggctggatagcaagctactcctggactta
ccgatccagttgatggacagactatccaatgaatccattatgttggtggtggagctggtg
cacagagctccagagcagctgctggcactgaccccactccaccaggcagccctggcagag
agggcactacaaaacctggctccaaaggagactccagtctcaggggaagtgctggagacc
ttaggccctttggttggattcctggggatagagagcacacgacagatccccctacagatc
ctgctgtcccatctcagtcagctgcaaggcttctgcctaggagagacatttaccacagag
ctgggatggctgctattgcaggagtctgttcttgggaaaccagagttgtggagccaggat
gaagtagagcaagctggacgcctagtattcactctgtctactgaggcaatttccttgatc
cccagggaggccttgggtccagagaccctggagcggcttctagaaaagcagcagagctgg
gagcagagcagagttggacagctgtgtagggggccacagcttgctgccaagaaagcagcc
ctggtagcaggggtggtgcgaccagctgctgaggatcttccagaacctgtaccaaattgt
gcagatgtacgagggacattcccagcagcctggtctgcaacccagattgcagagatggag
ctctcagactttgaggactgcctgacattatttgcaggagacccaggactcgggcctgag
gaactgcgggcagccatgggcaaagcaaaacagttgtggggtcccccccggggatttcgt
cttgagcagatcctgcagctcggtaggctcttaataggtctaggagatcgggaactacag
gagctgatcctagtggactggggagtgctgagcaccctggggcagatagatggctggagc
tccactcagctccgcattgtggtctccagtttcctacggcagagtggtcggcatgtgagc
cacctggacttcattcatctgacagcgctgggttatactctctgtggactgcggccagag
gagctccaacacatcagcagttgggagtttagccaagcagctctcttcctgggcaccctg
catctccagtgctctgaggaacaactggaggttctggcccacctccttgtactgcctggt
gggtttggcccagtcagtaactgggggcctgagatcttcactgaaattggcaccatagca
gctgggatcccagacctggctctttcagcactgctgcggggacagatccagggcattact
cctcttgccatttctgtcatccctcctcctaaatttgctgtggtgtttagtcccacccaa
ctatctagtctcaccagtgctcaggctgtggctgtcactcctgagcaaatggcctttctg
agtcctgagcagcgacgagcagttgcatgggcccaacatgaggggaaggagagcccagaa
cagcaaggtcgaagtacagcctggggcctccaggactggtcacgaccttcctggtccctg
gtattgactatcagcttccttggccacctgctatga
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integrated database retrieval system