Pongo abelii (Sumatran orangutan): 100437141
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Entry
100437141 CDS
T01416
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X4
KO
K06550
L1 cell adhesion molecule
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04360
Axon guidance
pon04514
Cell adhesion molecule (CAM) interaction
pon04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100437141 (L1CAM)
04517 IgSF CAM signaling
100437141 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100437141 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pon04515
]
100437141 (L1CAM)
04090 CD molecules [BR:
pon04090
]
100437141 (L1CAM)
04091 Lectins [BR:
pon04091
]
100437141 (L1CAM)
Cell adhesion molecules [BR:
pon04515
]
Immunoglobulin superfamily
L1 family
100437141 (L1CAM)
CD molecules [BR:
pon04090
]
Proteins
100437141 (L1CAM)
Lectins [BR:
pon04091
]
I-type lectins (Siglecs)
100437141 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Fn3_ROS1
Ig_5
Fn3_VIN3
Ig_PDGFR_d4
Laterosporulin
Motif
Other DBs
NCBI-GeneID:
100437141
NCBI-ProteinID:
XP_003779806
Ensembl:
ENSPPYG00000020858
UniProt:
A0A2J8RLK2
LinkDB
All DBs
Position
X:complement(160426205..160450941)
Genome browser
AA seq
1248 aa
AA seq
DB search
MVVALRYVWPLLLCSPCLLIQIPEELMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEV
QFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNSNFAQRFQGIYRCFASNKLGTAMS
HEIRLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERV
TMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFP
TNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKLGEE
DDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVT
WRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLP
AKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIR
DLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDP
SLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQ
LLVVGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSL
GKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEG
NETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYE
IKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHL
RGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGP
ASEFTFSTPEGVPGHPEALHLECQSNTSLLLRWQPPLSHNGVLTGYVLSYHPLDEGGKGQ
LSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGISDFGNISA
TAGENYSVVSWVPKEGQCNFRFHILFKALGEEKGGASLSPQYVSYNQSSYTQWDLQPDTD
YEIHLFKERMFRHQMAVKTNGTGRVRLPPAGFATEGWFIGFVSAIILLLLVLLILCFIKR
SKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDIKPLGSDDSLA
DYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggcgctgcggtacgtgtggcctctcctcctctgcagcccctgcctgcttatc
cagatccccgaggaattgatggagccacctgtcatcacggaacagtctccacggcgcctg
gttgtcttccccacagatgacatcagcctcaagtgtgaggccagtggcaagcctgaagtg
cagttccgctggacgagggatggtgtccacttcaaacccaaggaagagctgggtgtgacc
gtgtaccagtcaccccactctggctccttcaccatcacgggcaacaacagcaactttgcc
cagaggttccagggcatctaccgctgctttgccagcaataagctgggcaccgccatgtcc
catgagatccggctcatggctgagggtgcccccaagtggccaaaggagacagtgaagccc
gtggaggtggaggaaggggagtcagtggttctgccttgcaaccctcccccaagtgcagag
cctctccggatctactggatgaacagcaagatcttgcacatcaagcaggacgagcgggtg
acgatgggccagaacggcaacctctactttgccaatgtgctcacctccgacaaccactca
gactacatctgccacgcccacttcccaggcacccggaccatcattcagaaggaacccatt
gacctccgggtcaaggccaccaacagcatgattgacaggaagccgcgcctgctcttcccc
accaactccagcagccacctggtagccttgcaggggcagccattggtcctggagtgcatc
gccgagggctttcccacacccaccatcaaatggctgcgccccagcggccccatgccagcc
gaccgtgtcacctaccagaaccacaacaaaaccctgcagctgctgaaactgggcgaggag
gatgatggcgagtaccgctgcctggccgagaactcactgggcagtgcccggcacgcgtac
tatgtcactgtggaggctgccccgtactggctgcacaagccccagagccatctatatggg
ccaggagagactgcccgcctggactgccaagtccagggcaggccccaaccagaggtcacc
tggagaatcaacgggatccctgtggaggagctggccaaagaccagaagtaccggattcag
cgtggcgccctgatcctgagcaacgtgcagcccagtgacacaatggtgacccaatgtgag
gcccgcaaccggcacgggctcttgctggccaatgcctacatctacgttgtccagctgcca
gccaagatcctgactgcagacaatcagacgtacatggctgtccagggcagcactgcctac
cttctgtgcaaggccttcggagcacctgtgcccagtgttcagtggctggacgaggatggg
acaacagtgcttcaggacgaacgcttcttcccctatgccaatgggaccctgggcattcga
gacctccaggccaatgacactggacgctacttctgcctggctgccaatgaccaaaacaat
gtgaccatcgtggctaacctgaaggttaaagatgcaactcagatcactcaggggccccgc
agcgcaatcgagaagaaaggttcgagggtgaccttcacgtgccaggcctcctttgacccc
tccttgcagcccagcatcacctggcgtggggacggtcgagatctccaggagcttggggac
agtgacaagtacttcatagaggatgggcgcctggtcatccacagcctggactacagcgac
cagggcaactacagctgcgtggccagcactgaactggatgtcgtggagagtagggcacag
ctcttggtggtggggagccccgggccggtgccacggctggtgctgtccgacctgcacctg
ctgacgcagagccaggtgcgcgtgtcctggagtcctgcggaagaccacaatgcccccatt
gagaaatatgacattgaatttgaggacaaggaaatggcacctgaaaaatggtacagtctg
ggcaaggttccagggaaccagacctctaccaccctcaagctgtcgccctacgtccactac
acctttagggttactgccataaacaaatatggccccggggagcccagcccggtctctgag
actgtggtcacacctgaggcagccccagagaagaaccctgtggatgtgaagggggaagga
aatgagaccaccaatatggtcatcacgtggaagccgctccggtggatggactggaacgcc
ccccaggttcagtaccgcgtgcagtggcgccctcaggggacacgagggccctggcaggaa
cagattgtcagcgaccccttcctgatggtgtccaacacgtccaccttcgtgccctatgag
atcaaagtccaggccgtcaacagtcagggcaagggaccagagccccaggtcaccatcggc
tactctggagaggactacccccaggcaatccctgagctggaaggcattgaaatcctcaac
tcaagtgctgtgctggtcaagtggcggccggtggacctggcccaggtcaagggccacctc
cgcggatacaatgtgacgtactggagggagggcagtcagaggaagcacagcaagagacat
atccacaaagaccatgtggtggtgcccgccaacactaccagtgtcatcctcagtggcttg
cggccctatagctcctaccacctggaggtgcaggcctttaacgggcgaggattggggccc
gccagcgagttcaccttcagcaccccagagggagtgcctggccaccccgaggcgttgcac
ctggagtgccagtcgaacaccagcctgctgctgcgctggcagcccccactcagccacaac
ggcgtgctcaccggctacgtgctctcctatcaccccctggatgaggggggcaaggggcag
ctgtccttcaaccttcgggaccccgaacttcggacacacaacctgaccgatctcagcccc
cacctgcggtaccgcttccagcttcaggccaccaccaaagagggccctggtgaagccatt
gtacgggaaggaggcactatggccttgtctgggatctcagattttggcaacatctcagcc
acagcgggtgaaaactacagtgtcgtctcctgggtccccaaggagggccagtgcaacttc
aggttccatatcttgttcaaagccttgggagaagagaagggtggggcttccctctcgcca
cagtatgtcagctacaaccagagctcctacacgcagtgggacctgcagcctgacactgac
tatgagatccacttgtttaaggagaggatgttccggcaccagatggctgtgaagaccaac
ggcacagggcgcgtgaggctccctcctgctggcttcgccactgagggctggttcattggc
tttgtgagtgccatcatccttctgctcctcgtcctgctcatcctctgcttcatcaagcgc
agcaagggcggcaaatactcagtgaaggataaggaggacacccaggtggactctgaggcc
cgaccgatgaaagatgagaccttcggcgagtacagtgacaacgaggagaaggccttcggc
agcagccagccatcactcaacggggacatcaagcccctgggcagtgacgacagcctggct
gattatgggggcagcgtggatgttcagttcaacgaggatggttccttcattggccagtac
agtggcaagaaggagaaggaggcagcagggggcaatgacagctcaggggccacctccccc
atcaaccctgccgtggccctagaatag
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integrated database retrieval system
