Pongo abelii (Sumatran orangutan): 100437964
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Entry
100437964 CDS
T01416
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100437964 (TAF1B)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100437964 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Tectonin
Motif
Other DBs
NCBI-GeneID:
100437964
NCBI-ProteinID:
XP_002812348
Ensembl:
ENSPPYG00000012662
LinkDB
All DBs
Position
12:complement(122969983..123064410)
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AA seq
588 aa
AA seq
DB search
MDLEEAEEFKERCTQCAAVSWGLTDEGKYYCTNCHNVTERSQEVTSTDLIPNTQIKALNR
GLKKKSNTEKGWDWYVCEGFQYILYQQAEALKNLGVGPELKNDVLHNFWKRYLQKSKQAY
CKNPVYTTGRKPTVLEDNLSHSDWASEPELLSDVSCPPFLESGAESQSDIHTRKPFPISK
ASQSETSVCSGSLDGVEYSQRKEKGIVKMTVPRTLAFCYLSLLWQREAITLSDLLRFVEE
NHIPYINAFQHFPEQMKLYGRDRGIFGIESWPDYEDIYKKTIEVGTFLDLPRFPDITEDC
YLHPNILCMKYLMEVNLPDEMHSLTCHVVKMTGMGEVDFLTFDPIAKMAKTVKYDVQAVA
IIVVVLKLLFLLDDNFEWSLSNLAEKHNEKNKKDKPWFDFRKWYQIMKKAFDEKKQKWEE
ARAKYLWKSEKPLYYSFIDKPVAYKKREMVVNLQKQFSTLVDSTATAGKKSPSSFQFNWT
EEDTDRTCFHGHSLQGVLKEKGQSLLTKNSLYWLSTQKFCRCYCTHVTTYEESNYSLSYQ
FILNLFSFLLRIKTSLLHEEVSLVEKKLFEKKYSVTRKKSRSKKVRRH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgaggaggcggaagagtttaaagaacgctgtactcagtgtgctgctgtctca
tggggtcttactgatgaaggcaaatattattgcactaattgccacaatgttacagagaga
tctcaggaagttacaagcactgatcttattcctaatacccaaataaaagccctcaaccgg
gggcttaaaaaaaaaagcaatactgaaaaaggctgggattggtatgtgtgtgaaggtttc
cagtacattctttatcaacaagcagaagccttaaagaaccttggagtaggcccagagtta
aagaatgatgttttacataatttttggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagtttataccactggaaggaaacctacggtattagaagataatctaagt
cattcagactgggctagtgagcctgagctgctaagtgatgtcagctgtcctccttttctt
gaaagtggagcggagtctcagtctgacatccacactcgaaaacctttccccatcagcaaa
gcatcacaatcagaaacgtctgtctgctctggatctctggatggagttgaatactcacaa
cgaaaggagaagggaatcgtgaagatgaccgtgccacggacacttgccttctgttatctg
tccttactttggcagagagaagcaataacactttcagatcttttgagatttgttgaagag
aaccatattccttacataaatgcttttcagcattttccagaacagatgaaattatatgga
cgtgacagaggaatctttggtatagagtcttggcctgactacgaggatatctataaaaaa
acaatagaagttggcacatttttagatttgcctcgttttccagacataactgaagattgc
tatcttcatcccaacatactgtgtatgaaatacttgatggaagtcaacctccctgatgaa
atgcatagcttaacttgccacgtggtaaaaatgactggaatgggagaagtggattttctg
acatttgatcctatagctaaaatggcaaaaactgttaagtacgatgtacaagctgtagct
atcattgtggtggtattaaaactgctctttctattggatgacaatttcgagtggtctttg
tctaatcttgctgaaaagcataatgaaaagaacaaaaaagataagccatggtttgatttc
agaaagtggtaccaaattatgaagaaagcttttgatgagaaaaaacaaaaatgggaagaa
gcaagggccaagtacctgtggaaaagtgaaaagccactctactactcgtttatcgacaaa
ccagtagcatataaaaaaagagaaatggtggtgaatctacagaaacaatttagcacactg
gttgattcaacagcaactgctggaaaaaaaagcccttcaagttttcagttcaactggact
gaagaagacactgatagaacgtgtttccatggacacagccttcagggagtcctgaaagag
aaaggccaatcactgctaactaagaattcattatattggcttagtacacagaaattctgc
agatgctattgtacacacgtgacaacctatgaagaatcaaattattctctgagttatcag
tttatactaaatctcttctccttcctgctcagaataaagacttcccttctccatgaagaa
gtgagcttagttgagaagaaactttttgagaaaaaatacagtgtaacaagaaagaaatca
agatccaagaaagtgagacgacattga
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