KEGG   Pongo abelii (Sumatran orangutan): 100438107
Entry
100438107         CDS       T01416                                 
Symbol
LARP1B
Name
(RefSeq) la-related protein 1B isoform X4
  KO
K18757  la-related protein 1
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100438107 (LARP1B)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100438107 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 100438107
NCBI-ProteinID: XP_024101706
Ensembl: ENSPPYG00000029828
LinkDB
Position
3:149629167..149783996
AA seq 1104 aa
MSARAPMPTAHSREEPPAVTAERESLLAAANRPAEQPPPPEREGKEAVREERAAAATSAG
ARGEPSPALVLGRSVPQAAVPVRPLALHLAHKVRGPGGPFGGEPPPPPPPPPSPLPPLLR
DPPAEDAREEAAAGPAEKRQPPPLPPKRNPWTKKPPQHLSPDTTGPPPPPLETLEAEFGS
LKIIKAGKLKTKKSNKASDFSDMENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEK
RSNSESKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRN
SSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRG
RGRGRGNPRLNFDYSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEY
IKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTE
VEIVDEKMRKKIEPEKWPIPGPPPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRI
GSPLSPKKNSETSILQAMSRGLSTSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLN
QLCSSEEPEQEELDFLFDEEIEQIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYV
KKHPGGDRTGTHMSRAKITSELAKVINDGLYYYEQDLWMEEDENKHTAIKQEVENFKKLN
LISKEQFENLTPELPFEPNQEVPVAPSQSRQDLTDELAQKLFDVSEITSAAMVHSLPTAV
PESPRIHPTRTPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLEFH
VGWVMDSRDHGPRTSCVSTSNASPSEGAPLAGNYGCTPHSFPKFQHPSHELLKENGFTQQ
VYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYR
YGLECLFRFYSYGLEKKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSVD
PKLQEYLCSFKRLEDFRVDPPISEEFGRKRHSCTSGEESNRHRLPPNCSTKPPNAAKPTS
TSELQVPINSPRRNTSPESSDNSH
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgtctgctcgcgccccgatgcccaccgcccattctcgggaggagccgcctgcggtgact
gctgagagggagtcgctgttggccgcggcgaaccggccggccgagcagccgcccccgccc
gaacgtgagggcaaagaggcggtgagggaggagagggccgcggccgctactagcgctggg
gcgcggggagagccgtcgccggcgctggtgctgggacgcagcgtgccccaggcggctgtc
cccgtgaggcccctggcgctgcacctggcgcacaaggtgcgtgggcccgggggtcctttc
ggcggggagccgccaccaccgccaccgccgccgccgtcgccgttgccgccgttgctgcgg
gatccgccggccgaggacgcccgggaagaggcggcagctggccctgcggaaaagcggcag
ccgccgccgctgccgcctaaaagaaatccctggaccaaaaagcctccccagcacctgtcc
ccagacacgacaggtccgccaccgcccccgctggaaaccctggaggcagagttcggttcc
ctcaaaattataaaagcaggaaagctcaagacaaagaaatccaacaaggctagtgatttc
agtgatatggagaattggccaacaccaagtgaattagtgaacactggatttcagagcgtc
ctcagccaaggaaataaaaagccacaaaatagaaaagaaaaagaagaaaaggttgaaaag
agaagtaacagtgagagcaaagaaaaccgggaaacaaaattaaatggtcctggtgaaaac
gtcagtgaggatgaggctcagtcaagtaatcaacgaaagagagctaataagcacaagtgg
gtaccactccacttagatgttgtaagatcagagagtcaagaaagacctggatcccggaac
agctcaagatgtcaacctgaagcaaataaaccaacacataacaataggagaaatgataca
cgaagttggaagcgagatagagaaaaaagagacgatcaagatgacgtttccagtgtgaga
agtgagggtggtaatatccgaggttcctttagaggtcgaggaagaggccgaggacgggga
agaggacgaggcagaggaaatcctcgattgaactttgattattcatatggttatcaagaa
catggtgaaaggactgatcaaccatttcaaacagaacttaataccagtatgatgtattac
tatgatgatggtacaggtgtacaggtgtatcctgtggaagaagcattgcttaaagagtat
attaagcgtcaaattgaatactacttcagtgtagaaaatttggaacgagacttctttctt
cggggaaagatggatgaacaaggtttcttgcctatttccctgattgctggttttcagcgt
gttcaggctctcactacaaaccttaatctcatcttagaggcactgaaggatagcacagaa
gtagaaattgtggatgagaaaatgagaaaaaagatagaaccagaaaaatggccaattcca
ggccctcctccacgcagtgtgccaccaacagacttctctcaactgattgattgtccagag
tttgtaccaggccaagccttttgctcacatacagagtctgccccaaattctccaagaatt
ggaagcccattgagcccaaagaaaaacagtgaaacaagtattcttcaagcaatgtctaga
ggtttgtctaccagtttgcctgacctggactcagaaccttggatagaagttaaaaaaaga
catcagccagccccagtgaaattgagggaatcagtgtctgtccctgaagggtcattaaat
cagctatgttcttcagaagaaccagaacaagaagaacttgattttttgtttgatgaagag
attgaacaaataggacgaaaaaacacatttactgattggtctgataatgattcagattat
gaaattgatgaccaagacttaaacaagattttgattgtaactcagacaccaccttatgtg
aaaaaacatcctggaggagatcgaacaggcacccacatgtctcgggcaaaaatcacatct
gaacttgctaaagttatcaatgatggcttatattattatgaacaggatctatggatggaa
gaagatgaaaacaaacacacagccataaagcaagaagttgagaactttaagaagctaaat
ctcattagtaaagagcagtttgaaaacctaacacctgaacttccttttgagccaaaccaa
gaagttcctgtagcaccttcacagtccaggcaagatttgactgatgaattagctcagaag
ttatttgatgtttcagaaataacttcggcagcaatggttcattcgttgcctacagcagtt
ccagaatctcctagaattcatcctacaagaacacccaaaacacctcgaacacctaggtta
caagatcctaacaaaacaccaagattttatcctgttgttaaagaaccaaaagccattgat
gtaaagagtccaagaaagagaaaaacaaggcatagcacaaatccccctctagagtttcat
gttggttgggtaatggattccagagaccatgggccaagaacatcctgtgtcagcacttca
aatgcttcaccttcagaaggcgcaccactagcaggaaattatggatgtactcctcattca
ttcccaaagttccagcatccttctcatgaacttttgaaggaaaatggctttacccaacaa
gtataccacaagtatcgtcgaagatgcctaagtgagagaaaacgcttgggaattggtcag
tcccaagaaatgaataccctctttcgtttctggtcctttttcctcagagatcacttcaat
aaaaaaatgtatgaggaatttagacaacttgcttgggaagatgcaaaagaaaattacagg
tatgggttagaatgtctgttcaggttttatagttatggactggaaaaaaaattcaggcga
gaaatttttcaggatttccaagaagaaaccaaaaaagactacgaatctggtcagctctat
ggactagaaaagttttgggcttatttgaaatattctcaatctaagacacagtctgttgac
ccaaaacttcaggaatacctctgtagttttaagaggttagaagacttccgtgttgatccc
cctattagtgaggaatttggaagaaaaagacattcctgtacttctggtgaggagagtaat
cgtcatagacttccacctaattgctctacaaagccaccaaatgctgctaaacctacatct
accagtgagcttcaggtaccaataaactctcccagaaggaatacttcaccggagtccagt
gacaattcacattaa

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