KEGG   Pongo abelii (Sumatran orangutan): 100438567
Entry
100438567         CDS       T01416                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03013  Nucleocytoplasmic transport
pon03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100438567 (CASC3)
   03015 mRNA surveillance pathway
    100438567 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100438567 (CASC3)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100438567 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 100438567
NCBI-ProteinID: XP_024090145
Ensembl: ENSPPYG00000008467
UniProt: H2NU84
LinkDB
Position
19:70421717..70453708
AA seq 701 aa
MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRIGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHEISYRSRHLEQTPVR
DPSPEADAPVLGSPEKEEAASPAAAPDAAPPPPDRPIEKKSYSRARRTRTKVGDAVKLAE
EVPPPPEGLIPAPPVPETTPTPPTKTGNWEAPVDSTTGGLEQDVAQLNIAEQSWSPGQPS
FLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHINI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMLVQPEMHLPHPGLHPHQTPAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcttcgcaagacaccgaggacgaggaatctggtgct
tcgggctccgacagcggcggctccccgttgcggggaggcgggagctgcagcggtagcgct
ggaggcggcggcagcggctctctgccttcacagcgcggaggccgaatcggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcattgaaggtgatgctgttctctcggattatgaaagtgcagaagactcggaaggt
gaagaaggtgaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgttaattcttcaacaaaagaagagaagggagaagaaaaacctgacaccaaaagc
actgtgactggagagaggcaaagtggggacggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacatacctcggaaggggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgagcaggccccaaagtcccgacaggagctcattgctctttat
ggttatgacattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
ccccgatatgggagtccgccacaaagagatccaaactggaatggtgagcggctaaacaag
tctcatcgccaccagggtcttgggggcaccttaccaccaaggacatttattaacaggaat
gctgcaggtactggccgtatgtctgcacccaggaattattctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaagctggtgggcagcatggtggccggtctggt
gagactgttaagcatgagattagttaccggtcacggcacctagagcagactcctgtgagg
gatccatctccagaagcagatgctccagtgcttggcagtcctgagaaggaggaggcagcc
tcaccagctgctgctcctgatgctgcaccaccaccccctgataggcccattgagaagaaa
tcctattcccgagcaagaagaactcgaaccaaagttggagatgcagtcaagcttgcagag
gaggtgccccctcctcctgaaggactgattccagcacctccagtcccagaaaccacccca
actccacctactaagactgggaactgggaagctccagtggattctactacaggtggactt
gagcaagatgtggcacaactaaatatagcagaacagagttggagtccggggcagccttct
ttcctgcaaccacgggaacttcgaggtatgcccaaccatatacacatgggagcaggacct
ccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagccaaacgctat
tcatcccagcgtcaaagacctgtgccagagccccccgcccctccagtgcatatcaatatc
atggaaggacattattatgatccactgcagttccagggaccaatctatacccatggtgac
agccctgccccgctgcctccacagggcatgcttgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagacaccagctcctctgcccaatccaggcctctatccccca
ccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccgccgcctcatctatatcctaatacacaggccccatcacaggtatatgga
ggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctccccaccccgg
aggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcaggggttcc
agttaa

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