Pongo abelii (Sumatran orangutan): 100438567
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Entry
100438567 CDS
T01416
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03013
Nucleocytoplasmic transport
pon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100438567 (CASC3)
03015 mRNA surveillance pathway
100438567 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100438567 (CASC3)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100438567 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100438567
NCBI-ProteinID:
XP_024090145
Ensembl:
ENSPPYG00000008467
UniProt:
H2NU84
LinkDB
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Position
19:70421717..70453708
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AA seq
701 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRIGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHEISYRSRHLEQTPVR
DPSPEADAPVLGSPEKEEAASPAAAPDAAPPPPDRPIEKKSYSRARRTRTKVGDAVKLAE
EVPPPPEGLIPAPPVPETTPTPPTKTGNWEAPVDSTTGGLEQDVAQLNIAEQSWSPGQPS
FLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHINI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMLVQPEMHLPHPGLHPHQTPAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaagacaccgaggacgaggaatctggtgct
tcgggctccgacagcggcggctccccgttgcggggaggcgggagctgcagcggtagcgct
ggaggcggcggcagcggctctctgccttcacagcgcggaggccgaatcggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcattgaaggtgatgctgttctctcggattatgaaagtgcagaagactcggaaggt
gaagaaggtgaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgttaattcttcaacaaaagaagagaagggagaagaaaaacctgacaccaaaagc
actgtgactggagagaggcaaagtggggacggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacatacctcggaaggggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgagcaggccccaaagtcccgacaggagctcattgctctttat
ggttatgacattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
ccccgatatgggagtccgccacaaagagatccaaactggaatggtgagcggctaaacaag
tctcatcgccaccagggtcttgggggcaccttaccaccaaggacatttattaacaggaat
gctgcaggtactggccgtatgtctgcacccaggaattattctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaagctggtgggcagcatggtggccggtctggt
gagactgttaagcatgagattagttaccggtcacggcacctagagcagactcctgtgagg
gatccatctccagaagcagatgctccagtgcttggcagtcctgagaaggaggaggcagcc
tcaccagctgctgctcctgatgctgcaccaccaccccctgataggcccattgagaagaaa
tcctattcccgagcaagaagaactcgaaccaaagttggagatgcagtcaagcttgcagag
gaggtgccccctcctcctgaaggactgattccagcacctccagtcccagaaaccacccca
actccacctactaagactgggaactgggaagctccagtggattctactacaggtggactt
gagcaagatgtggcacaactaaatatagcagaacagagttggagtccggggcagccttct
ttcctgcaaccacgggaacttcgaggtatgcccaaccatatacacatgggagcaggacct
ccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagccaaacgctat
tcatcccagcgtcaaagacctgtgccagagccccccgcccctccagtgcatatcaatatc
atggaaggacattattatgatccactgcagttccagggaccaatctatacccatggtgac
agccctgccccgctgcctccacagggcatgcttgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagacaccagctcctctgcccaatccaggcctctatccccca
ccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccgccgcctcatctatatcctaatacacaggccccatcacaggtatatgga
ggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctccccaccccgg
aggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcaggggttcc
agttaa
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integrated database retrieval system