KEGG   Pongo abelii (Sumatran orangutan): 100438870
Entry
100438870         CDS       T01416                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pon03041]
    100438870 (SMU1)
Spliceosome [BR:pon03041]
 Complex B
  Other components
   Complex B specific factors
    100438870 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_IP5PC_F TFIIIC_delta Beta-prop_DCAF12 DUF7165 VPS8_N KNTC1_N PROPPIN Beta-prop_NOL10_N LisH zf_topless
Other DBs
NCBI-GeneID: 100438870
NCBI-ProteinID: XP_024108264
Ensembl: ENSPPYG00000019140
UniProt: H2PRY1
LinkDB
Position
13:24876458..24908981
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgaatcttcggatgtgatccgccttatcatgcagtacttgaaggag
aacagtttacatcgggcgttagccaccttgcaggaggagactactgtgtctctgaatact
gtggacagcattgagagttttgtggctgacattaacagtggtcattgggatactgtgttg
caggctatacagtctctgaaattgccagacaaaaccctcattgacctctatgaacaggtt
gttctggaattgatagagctccgtgaattgggtgctgccaggtcacttttgagacagact
gatcccatgatcatgttaaaacaaacacagccagagagatatattcatctggagaacctt
ttggccaggtcttactttgatcctcgtgaggcatacccagatggaagtagcaaagaaaag
agaagagcagcaattgcccaggccttagctggtgaagtcagtgtggtgcctccatctcgt
ctcatggcattgctgggacaggcactgaagtggcagcagcatcagggattgcttcctcct
ggtatgaccatagatttgtttcgaggcaaggcagctgtcaaagatgtggaagaagaaaag
tttcctacgcaactgagcaggcatattaagtttggtcagaaatcacatgtggagtgtgct
cgattttctccagatggtcagtatttggtcactgggtctgttgatggattcattgaagta
tggaactttactactggaaaaatcagaaaggatcttaagtaccaggcccaagataacttt
atgatgatggatgatgctgtcctctgcatgtgtttcagcagagatacagaaatgttagca
actggagcccaagatggaaaaatcaaggtgtggaagattcagagtggacaatgtttaagg
agatttgagagggcacacagtaagggtgtcacctgtctaagcttttctaaggatagcagt
cagatccttagtgcttcttttgaccagacaattagaattcatggtttaaaatctgggaaa
accctgaaggaatttcgtggccattcctcctttgttaatgaagcaacatttacacaagat
ggacattacattattagtgcatcctctgatggcactgtaaagatctggaatatgaagacc
acagaatgttcaaatacctttaaatccctgggcagcaccgcagggacagatattaccgtc
aacagtgtgattctacttcctaaaaaccctgagcactttgtggtgtgcaacagatcaaac
acggtggtcatcatgaacatgcaggggcagattgtcagaagcttcagttctggtaaaaga
gaaggtggggactttgtttgctgtgccctctctccccgtggtgaatggatctactgtgta
ggggaagactttgtgctctactgtttcagtacagtcactggcaaactggagagaactttg
acagtgcatgagaaggatgtgattggtattgcacatcaccctcatcagaacctgattgct
acctacagtgaagatggactcctaaagctctggaaaccataa

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