Pongo abelii (Sumatran orangutan): 100439289
Help
Entry
100439289 CDS
T01416
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100439289 (TBL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pon03009
]
100439289 (TBL3)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100439289 (TBL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Utp13
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
100439289
NCBI-ProteinID:
XP_002826027
Ensembl:
ENSPPYG00000006977
LinkDB
All DBs
Position
18:2074845..2082744
Genome browser
AA seq
808 aa
AA seq
DB search
MAETATGVGRFKANYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGTVLRS
LEQEDQESITAFDLSPDDEVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPT
STLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVW
SLQDRSCLAVLTAHYSAVTSLSFSTDGHTMLSSGRDKICIIWDLQSCQAARTVPVFESVE
AAVLLPEEPVSQLGVTSPGLYFLTAGDQGTLRVWEAASGQCVYTQARPPGPGRELTHCTL
ARTAGLVLTTTADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK
VFELQTSACQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVICVAQGSGH
THSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQARTTQRCHDK
DINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATAS
ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRT
LDAHEDKVWGLHCSRLDDRALTGASDSRVILWKDVTEAEQAEEQARQEEQVVRQQELDNL
LHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATMLRLRRDQKEALLRFCVT
WNTNSRHCHEAQAVLGVLLRREAPEELLTYEGVRAALEALLPYTERHFQRLSRTLQAATF
LDFLWHNMKLPVLATAPTPWETHKGALP
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgcgaccggagtgggccgcttcaaggccaactatgctgtggagcgcaaa
attgagcctttctacaagggcggaaaagcacagctggaccagactggccagcacctcttc
tgcgtctgtggcaccagagtcaacattctggaagtggcttcggggaccgtgctgcggagt
ctggagcaggaggaccaggagagcatcactgcctttgacctcagccctgacgacgaggtg
ctggtgacagccagccgggcattgctgctggctcagtgggcctggcaagagggcagcgtt
acccgcctgtggaaggcgatacacacagcccccgtggccaccatggccttcgaccccacc
tccactctgctagccacaggtggctgtgatggggccgtgcgcgtctgggacatcgtgcgg
cactacgggacacaccacttccgaggctcgcccggtgtcgtgcacctagtggccttccac
ccggaccctacacgcctgctgctcttctcctcggccacagatgccgccatccgcgtgtgg
tcactgcaggaccggtcatgcctggctgtgctgactgcccactacagcgccgtcacctca
ctgtccttcagcaccgatggccacaccatgctcagctccggccgtgacaagatctgtatc
atctgggaccttcagagctgccaggccgcgaggaccgtgcctgtgtttgagagtgtggag
gctgctgtgctgttgccagaggagccggtgtcccagctgggtgtgacgtccccaggcctg
tactttctgacagctggcgaccaaggcactctgcgcgtgtgggaggcagcttctgggcag
tgtgtgtacacgcaggcccggccgccgggccctgggcgggagctgacccactgcaccctg
gcacgcactgccggcctggtcctcaccaccaccgccgaccacaacctgttgctctatgag
gctcgctccctacggctgcagaaacagtttgctggctacagtgaggaggttctggatgtc
cggtttcttgggcccgaggactcccacgttgtcgtggcctccaatagcccctgcctgaaa
gtgtttgagctgcagacgtcagcctgccagatcctccatggccacacggatatcgtcctg
gccctggatgtgttccggaaggggtggctctttgccagctgtgccaaggatcagagcgtc
cgcatctggagaatgaacaaggctggccaggtgatctgcgtggctcagggttccggtcac
acacacagcgtgggcactgtctgctgctctaggctgaaggagtccttcctggtaacaggc
agccaggactgcactgtgaagctgtggcctcttcccaaagccttgctgtccaagaacaca
gccccagacaacggccccatcctcctgcaggcccggaccactcagcgctgccatgataag
gacatcaacagcgtggctattgcccccaatgacaagctgctggccacaggctcacaggac
cgcacagccaagctctgggccctgccgcagtgccagctgctgggtgtcttctcaggccac
cggcgtggcctctggtgcgtccagttctctcccatggaccaggtgctggccacggcctca
gctgacggcaccatcaagctctgggcactccaggacttcagctgtctcaagacatttgag
gggcacgatgcttctgtgctgaaagtggcctttgtgagccgtggcacgcagctgctgtcc
agcggctcggatggcctcgtgaagctctggaccatcaagaacaacgagtgtgtgcggacg
ctggatgcccacgaggacaaggtctgggggctgcactgcagccggctggacgaccgcgcc
ctcactggggccagtgactcccgagtcatcctctggaaggatgtgaccgaggcggagcag
gcagaggagcaggccaggcaagaggaacaggtggtcaggcagcaagagctggacaacctg
ctgcatgagaagcggtacctgcgggcgctgggcctggccatctccctggatcggccccac
accgtgctgactgtcatccaggccatccggagggaccctgaggcctgcgagaagctggaa
gccaccatgctccgactgcggcgcgaccagaaagaggccctgctgcgcttctgcgtcacg
tggaacaccaactcgcggcactgccacgaggcccaggccgtgctgggtgtgctcctgcgg
cgtgaggcccccgaggagctgctgacctacgaaggcgtgcgggcagcgcttgaggccctg
ctgccctacactgagcggcactttcagcggctcagcaggaccctccaggccgccactttc
ttggacttcctgtggcacaacatgaagctccctgtgctggccactgcccccaccccctgg
gaaacccataaaggcgctctcccctag
DBGET
integrated database retrieval system