Pongo abelii (Sumatran orangutan): 100439439
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Entry
100439439 CDS
T01416
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X4
KO
K08528
retinoic acid receptor beta
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon05200
Pathways in cancer
pon05222
Small cell lung cancer
pon05223
Non-small cell lung cancer
pon05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100439439 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
100439439 (RARB)
05222 Small cell lung cancer
100439439 (RARB)
05223 Non-small cell lung cancer
100439439 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100439439 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pon03310
]
100439439 (RARB)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100439439 (RARB)
Nuclear receptors [BR:
pon03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
100439439 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Topoisom_I_N
Motif
Other DBs
NCBI-GeneID:
100439439
NCBI-ProteinID:
XP_002814046
Ensembl:
ENSPPYG00000014062
UniProt:
H2PBB6
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All DBs
Position
2:complement(129077314..129857046)
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AA seq
448 aa
AA seq
DB search
MFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKETSKQECTESYEMTAELDDL
TEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRR
PSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
SGNTAEHSPSISPSSVENSGVSQSPLVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgttctgtcagtgagtcctgggcaaatcctggatttctacact
gcgagtccgtcttcctgcatgctccaggagaaagctctcaaagcatgcttcagtggattg
acccaaaccgaatggcagcatcggcacactgctcaatcgattgaaacacagagcaccagc
tctgaggaactcgtcccaagccccccatctccacttcctccccctcgagtatacaaaccc
tgcttcgtctgccaggacaaatcatcagggtaccactatggggtcagcgcctgtgaggga
tgtaagggctttttccgcagaagtattcagaagaatatgatttacacttgtcaccgagat
aagaactgtgttattaataaagtcaccaggaatcgatgccaatactgtcgactccagaag
tgctttgaagtgggaatgtccaaagaatctgtcaggaatgacaggaacaagaaaaagaag
gagacttcgaagcaagaatgcacagagagctatgaaatgacagctgagttggacgatctc
acagagaagatccgaaaagctcaccaggaaactttcccttcgctctgccagctgggtaaa
tacaccacgaattccagtgctgaccatcgagtccgactggacctgggcctctgggacaaa
ttcagtgaactggccaccaagtgcattattaagatcgtggagtttgctaaacgtctgcct
ggtttcactggcttgaccatcgcagaccaaattaccctgctgaaggccgcctgcctggac
atcctgattcttagaatttgcaccaggtataccccagaacaagacaccatgactttctca
gacggccttaccctaaatcgaactcagatgcacaatgctggatttggtcctctgactgac
cttgtgttcacctttgccaaccagctcctgcctttggaaatggatgacacagaaacaggc
cttctcagtgccatctgcttaatctgtggagaccgccaggaccttgaggaaccgacaaaa
gtagataagctacaagaaccattgctggaagcactaaaaatttatatcagaaaaagacga
cccagcaagcctcacatgtttccaaagatcttaatgaaaatcacagatctccgtagcatc
agtgctaaaggtgcagagcgtgtaattaccttgaaaatggaaattcctggatcaatgcca
cctctcattcaagaaatgctggagaattctgaaggacatgaacccttgaccccaagttca
agtgggaacacagcagagcacagtcctagcatctcacccagctcagtggaaaacagtggg
gtcagtcagtcaccactcgtgcaataa
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