Pongo abelii (Sumatran orangutan): 100439490
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Entry
100439490 CDS
T01416
Symbol
APTX
Name
(RefSeq) aprataxin isoform X3
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100439490 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pon03400
]
100439490 (APTX)
Enzymes [BR:
pon01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
100439490 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
100439490 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
100439490 (APTX)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100439490 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
100439490 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
FtsK_SpoIIIE_N
Motif
Other DBs
NCBI-GeneID:
100439490
NCBI-ProteinID:
XP_002819752
Ensembl:
ENSPPYG00000019142
UniProt:
A0A6D2Y197
LinkDB
All DBs
Position
13:24951482..24981696
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AA seq
356 aa
AA seq
DB search
MSNVNLSVTDVWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
PGLETHRKRKRSGNSDSIERDAAQEAEPGTGLEPGSNPSQCSVPLKKGKDAPIKKESLGH
WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVTREHLELLKH
MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
FLESQAVIEMVQEAGRVTVRDGMPELLKLPLHCHECQQLLPSIPQLKEHLRKHWTQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtaaatttgtccgtcaccgacgtctggagagtgatgatgcgggtgtgctgg
ttggtgagacaggacagccggcaccagcgaatcagacttccacatttggaagcagttgtg
attgggcgtggcccagagaccaagatcactgataagaaatgttctcgacagcaagtacag
ttgaaagcagagtgtaacaagggatatgtcaaggtaaagcaggtaggagtcaatcccacc
agcattgactcagtcgtaattgggaaggaccaagaggtgaagctgcagcctggccaggtt
ctccacatggtgaatgaactttatccatatattgtagagtttgaggaagaggcaaagaac
cctggcctggaaacacacaggaagaggaagagatcaggcaacagtgattctatagaaagg
gatgctgctcaggaagctgagcctgggacagggctggaacctgggagcaaccctagccaa
tgctctgtgcccctaaagaagggaaaagatgcacctatcaaaaaggaatccctgggccac
tggagtcaaggcttgaagatttctatgcaggaccccaaaatgcaggtttacaaagatgag
caggtggtggtgataaaggataaatacccaaaggcccgttaccattggctggtcttaccg
tggacctccatttccagtctgaaggctgtgaccagggaacaccttgaactcctcaagcat
atgcacactgtgggggaaaaggtgattgtagattttgctgggtccagcaaactccgcttc
cgattgggctaccacgccattccgagtatgagccatgtacatcttcatgtgatcagccag
gattttgattctccttgccttaaaaacaaaaaacattggaattctttcaatacagaatac
ttcctagaatcacaagctgtgatcgagatggtacaagaggctggtagagtgactgtccga
gatgggatgcctgagctcttgaagctgccccttcattgtcatgagtgccagcagctgctg
ccttccattcctcagctgaaagaacatctcaggaagcactggacacagtga
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integrated database retrieval system