Pongo abelii (Sumatran orangutan): 100440234
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Entry
100440234 CDS
T01416
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pon03400
]
100440234 (SMC5)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100440234 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SYCE1
DUF493
AAA_29
FtsK_SpoIIIE
AAA_25
Med9
Motif
Other DBs
NCBI-GeneID:
100440234
NCBI-ProteinID:
XP_024108357
Ensembl:
ENSPPYG00000019283
LinkDB
All DBs
Position
13:60665532..60761237
Genome browser
AA seq
1153 aa
AA seq
DB search
MRRRGARSRERARGSSSRQFAPERGAWALGRLGVWAAGRWERKSLWVAEEARMATPSKKT
STPSPQASKRALPRDPSSEVPSKRKNSAPQLPLLQSSGPFVEGSIVRISMENFLTYDICE
VSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSRGMVEIELF
RASGNLVITREIDVAKNQSFWFINKKATSQKIVEEKVAALNIQVGNLCQFLPQDKVGEFA
KLSKIELLEATEKSVGPPEMHRYHCELKNFRENEKQLETSCKEKTEYLQKMVQRNERYKQ
DVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLVRDRVKEEVRKLKEGQVPITR
RIEEMENERRNLEARIKEKATDIKEATQKCKQKQDVIERKDKHIEELQQALIVKQNEELD
RQKRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLKRIQDEKALCEGEIIDKRRER
ETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRDKFKQRVCEPIMLT
INMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADK
APSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETR
LKQIYTAEEKYVVKTSFYSNKVISSNTSLKGAQFLTVTVDLEQRRHLEEQLKEIYRKLQA
VDSVLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSLKLMEQDTCNL
EEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNTTVISEKNKLESDY
MAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTLPQEYQTQVPTIPN
GHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELK
GKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDK
YGIRIRVKFRSSTQLHELTPYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPV
NERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPYMLEPNRWNLKAF
QRRRRRITFTQPS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggcgcggcgcgagatcgcgggagcgagcgcgcggtagcagttcgcggcagttc
gcgccggagcggggcgcgtgggctcttgggcgcttgggagtctgggctgcaggacggtgg
gaacggaagtcgttgtgggtcgctgaggaagccaggatggcgactccgagcaagaagacg
tcaactccaagtccccaggcttccaagagagctctcccgagagacccttcgtcggaggtc
ccgagcaagaggaagaattcggccccgcagctgccgctattgcagtcgtccgggcctttc
gtggaaggctctatcgtccgcatctcgatggagaacttcctaacatatgatatttgtgaa
gtatctcctggaccccacttgaatatgatcgttggagccaatggaacagggaagtcaagc
attgtatgtgccatttgccttggtttagctgggaaacctgctttcatgggacgagcggat
aaggttgggttttttgtgaagagaggatgttctagaggcatggttgaaattgaattgttc
agggcttctggaaatcttgtaatcacccgtgagattgatgtggcaaaaaatcagtcgttt
tggttcatcaacaaaaaagctacaagccagaaaatagtggaagagaaagttgcagcctta
aatattcaagtggggaatctttgccagtttctccctcaggacaaagttggagaatttgct
aaactcagcaaaattgaactcctcgaagccactgaaaagtcagttggtcccccagaaatg
cacagatatcactgtgaactcaaaaacttcagggagaatgaaaaacagctcgagacctca
tgcaaagagaaaactgagtatctacagaaaatggttcagaggaatgaaagatataaacaa
gatgtggagaggttctacgaacggaagcgacatttagatttaattgagatgcttgaagca
aaaaggccatgggtggaatatgaaaatgttcgtcaggaatatgaagaagtaaaactagtt
cgtgaccgagtgaaggaagaggtcagaaaacttaaagaagggcaggttcctataacacgt
cgaattgaagaaatggaaaacgagcgtcgcaatttggaggctcgaatcaaagaaaaggca
acagatattaaggaggcaactcaaaaatgcaaacagaagcaagatgttatagaaaggaaa
gataaacatattgaggaacttcagcaggctttaatagtaaagcaaaatgaagagcttgac
cgacagaagagaataggtaatacccgcaaaatgatagaggatttgcaaaatgaactaaag
accacagaaaactgcgagaatcttcagccccagattgatgccattacaaatgatctgaaa
cggattcaggatgaaaaggcattatgtgaaggcgagataattgataagcgaagagagagg
gaaactctagagaaggagaaaaagagtgtggatgatcatattgtacgttttgacaatctt
atgaatcagaaggaagataagctaagacagagattccgtgacacgtatgatgctgtttta
tggctaagaaataacagagacaaatttaaacaaagagtctgtgagcccataatgctcacg
atcaatatgaaagataataaaaatgccaaatatattgaaaatcatattccatcaaatgac
ttaagagcctttgtatttgaaagtcaagaagatatggaggttttcctcaaagaggttcgt
gacaataaaaaattaagagtaaatgctgttattgctcccaagagttcatatgcagacaaa
gcaccttcaagatctttgaatgaacttaaacaatacggatttttctcttatttgagagaa
ttatttgatgcacctgatcctgtaatgagttacctttgctgtcagtatcatattcatgaa
gttcctgtaggaactgaaaagaccagagaaagaattgaacgggtaatacaagaaacccga
ttaaaacagatttatacagcagaagaaaagtatgtggtgaaaacttctttttattcaaac
aaagttatttctagtaacacatctctaaaaggagcgcagtttctcactgtcactgtggac
ctagagcagagaagacacttagaagaacagctaaaggaaatttatagaaaattgcaagca
gtggattcagtgttgattgccttacgtgaaacaagcaaacatctggagcacaaagacaat
gaacttagacaaaagaagaaggagcttcttgagagaaaaaccaagaaaagacaactggaa
caaaaaatcagttccaaactaggaagtttaaagctgatggaacaagatacttgcaacctt
gaagaggaagagcgaaaagcaagtaccaaaatcaaagaaataaatgttcaaaaagcaaaa
cttgttaccgaattaacaaacctaataaagatttgtacttctttgcatatacaaaaagta
gatttaattctccaaaatactacagtgatctctgagaagaacaaattagaatcagattat
atggccgcatcttcacaactccgtcttacagagcaacatttcattgaattggatgaaaat
agacagagattattgcagaaatgcaaggaacttatgaagagagctaggcaagtatgtaac
ctgggtgcagagcagactcttcctcaagaataccagacacaagtacccaccattccaaat
ggacacaactcctcactccccatggttttccaagaccttccaaacacattggatgaaatt
gatgctttattaactgaagaaagatcaagagcttcctgcttcacgggactgaatcctaca
attgttcaggaatatacaaaaagagaagaagaaatagaacagttaactgaggaactaaag
ggaaagaaagttgaactagatcaatacagagaaaacatttcacaggtaaaagaaaggtgg
cttaatcctttaaaagagctggtagaaaaaattaatgaaaaattcagcaatttttttagt
tccatgcagtgtgctggtgaagttgatctccatacagaaaatgaggaagattatgataaa
tatggaattcgaattagagtcaaatttcgcagtagtactcaactgcatgaattaactcct
tatcatcaaagtggaggtgaaagaagtgtttctaccatgttatacttgatggcacttcag
gagctaaatagatgtccatttagagtagttgatgaaatcaatcagggaatggacccagtc
aatgaacggagagtgtttgaaatggttgtaaatactgcctgtaaagaaaatacatctcaa
tactttttcataacaccaaagctcctgcaaaatcttccttattctgaaaagatgacagtt
ttgtttgtctacaatggcccttatatgctggaaccaaacagatggaatttaaaggctttc
caaaggcggcggcgccgtattacattcactcagccttcttaa
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