Pongo abelii (Sumatran orangutan): 100440268
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Entry
100440268 CDS
T01416
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X2
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100440268 (RBBP6)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100440268 (RBBP6)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
U-box type E3
100440268 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100440268
NCBI-ProteinID:
XP_024089234
Ensembl:
ENSPPYG00000007201
UniProt:
H2NQF7
LinkDB
All DBs
Position
18:27634332..27667534
Genome browser
AA seq
1758 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPAMATTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSTHPAPSISSLTSNQSSLAPPVSGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGTSSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPTNLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEESKSPYSGSS
YSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYH
RSRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDIKAYYGR
SVDFRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSP
LTRGRREDYVGGQSHRSRNIGSNYPEKLAARDGHNQKDNTKSKEKESENAPGDGKGNKHK
KHRKRRKGEESEGFLNPELLETSRKSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAE
SITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGEREKSPR
SEPPIKKAKEETPKTDNAKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDY
SKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSVKISKLEVTE
IMKPSPKRKMEPDTEKMDRTPEKDKISSTAPAKKIKLNRETGKKIGSTENISNTKEPSEK
LESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIK
TMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPMSSVGKPASVIKNVST
KPSNIVKYPEKESEPSEKIQKFTKDVSHEVTQHEVKSSKNSASSEKGKTKDRDYSVLEKE
NPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKK
TDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNS
SPSRDRKPHDHKATYDTKRPNEEIKSVDKNPCKDREKHVLEARNNKESSGNKLLYIINPP
ETQVEKEQITGQIDKNTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKE
EETSGNISKDLKDKIVEKAKEILDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSH
SSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNK
DKEKEKEKDDQKVKSVTV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgacaccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaatgcgcagacgaaagaagaatatactgatgat
aatgctctgattcctaagaattcgtctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagcgatggcaactacaaaa
gcaattgatgactcttccgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggtccaccacctccatcttacacg
tgtttccgttgtggtaaacctggacattatattaagaattgcccaacaaatggggataaa
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagtttcatgatg
gaagtgaaagatcctaatatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaactatagatgcagaagcatatgcaattgggaagaaagagaaacctccattcttacca
gaggagccatcttcttcctcagaagaagatgatcctatcccagatgaattgttgtgtctc
atctgcaaggatatcatgactgatgctgttgtgattccctgctgtggaaacagttactgt
gatgaatgtataagaacagcactcctggaatcagatgaacatacatgtccaacgtgtcat
cagaatgatgtttctcctgatgctttaattgccaataaatttttacgacaggctgttaat
aacttcaaaaatgaaactggctatacaaaaagactacgaaaacagttacctcctccacca
cccccaataccacctccgagaccactgattcagaggaacctacaacctctgatgagatct
ccaatatcaagacaacaagatcctcttatgattccagtgacatcttcatcaactcaccca
gctccgtctatatcttcattaacttctaatcagtcttccttggcccctcctgtgtctgga
aatccatcttctgctccagctcctgtacctgatataactgcaacagtgtccatatcagtt
cattcagaaaaatcagatggaccttttcgggattctgataataaaatattgccagctgca
gctcttgcatcagagcactcaaagggaacctcctcaattgcaattactgctcttatggaa
gagaagggttaccaggtgcctgttcttggaaccccatctttgcttggacagtcattattg
catggacagttgatccccacaactggtccagtaagaataaatactgctcgtccaggtggt
ggtcgaccaggctgggaacattccaacaaacttggctatctggtttctccaccacaacaa
attagaagaggggagaggagctgctacagaagtataaaccgtgggcgacaccacagcgaa
agatcacagaggactcaaggcccgtcactaccagcaactccagtctttgtacctgttcca
ccacctcctttgtatccgcctcctccccatacacttcctctccctccaggtgttcctcct
ccacagttttctcctcagtttcctcctggccagccaccacccgctgggtatagtgtacct
cctccagggtttcctccagctcctaccaatttatcaacaccttgggtatcatcaggagtg
cagacagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcagcgacgactaaaagaagagtctaaatctccctatagtggttcttcg
tattcaagaagttcatacacttattctaaatcaagatctggttcaacacgttcacgctct
tattctcgatcattcagccgctcacattctcgttcctattcacggtcacctccatacccc
agaagaggcagaggcaagagccgcaattaccgttcacggtctagatctcatggatatcat
cgatctaggtcaaggtcacccccttatagacgctatcattcacgatcaagatctcctcaa
gcgtttaggggacagtctcctaataaacgtaacgtacctcaaggggaaacagaacgtgaa
tattttaatagatacagagaagttccaccaccatatgacattaaagcatattatgggaga
agtgttgactttagagacccatttgaaaaagaacgctaccgagaatgggagagaaaatat
agagagtggtatgaaaaatattataaaggttatgctgctggagcacagcctaggccctca
gcaaatagggagaacttttctccagagagatttttaccacttaacatcaggaattctccc
ctcacaagaggccgccgagaagattatgttggtgggcaaagtcatagaagtcgaaacata
ggtagcaactatccagaaaagcttgcagcaagagatggtcacaatcagaaggataataca
aagtcaaaagagaaggagagtgaaaacgctccaggagatggtaaaggaaataagcataag
aaacacagaaaaagaagaaaaggggaggaaagtgagggttttctgaacccagagttatta
gagacttctaggaaatcaagagaacctacaggtgttgaagaaaataaaacagactcattg
tttgttctcccaagtagagatgatgccacacctgttagagatgaaccaatggatgcagaa
tcaatcacttttaaatcagtgtctgaaaaagacaagagagaaagggataaaccaaaagca
aagggtgataaaaccaaacggaagaatgatggatctgctgtgtccaaaaaagaaaatatt
gtaaaacctgctaaaggaccccaagaaaaagtagatggagaacgtgagaaatctcctcgc
tctgaacctccaattaaaaaagccaaagaggagactccaaagactgacaatgctaaatca
tcatcttcctctcagaaggatgaaaaaatcactggaacccccaggaaagctcactctaaa
tcagcaaaagaacaccaagaaacaaaaccagtcaaagaggaaaaagtgaagaaggactat
tccaaagatgtcaaatcagaaaagctaacaactaaggaagaaaaggccaagaagcctaat
gagaaaaacaaaccacttgataataagggagaaaaaagaaaaagaaaaactgaagaaaaa
ggtgtagataaagattttgagtcttcttcagtgaaaatctcgaaactagaagtgactgaa
ataatgaaaccatcaccaaagcgcaaaatggaacctgatactgaaaaaatggataggacc
cctgaaaaggacaaaatttcttcaactgcaccagccaaaaaaatcaagctcaacagagaa
actgggaagaaaattggaagtacagaaaatatatcaaacacaaaagaaccctctgaaaaa
ttggagtcaacatctagcaaagttaaacaagaaaaagtcaaaggaaaggtcagaagaaaa
gtgactggaactgaaggatccagctcaactctggtggattataccagtacgagctcaact
ggaggcagtcctgtgcggaaatctgaagaaaaaacagatacaaagcgaactgtgattaaa
acgatggaagaatataataatgacaatacggcgccagctgaagatgttatcattatgatt
caggttcctcaatccaaatgggataaagatgactttgaatctgaagaagaagatgttaaa
tccacacagcctatgtcaagtgtaggaaaacctgctagtgttataaaaaatgttagtaca
aagccatcaaatatagtcaagtatcctgagaaagaaagtgagccatcagagaaaattcag
aaattcaccaaggacgtgagccatgaagtcacacaacacgaggttaaaagttcaaaaaac
tctgcatctagtgaaaaagggaagaccaaagatcgagattattcagtgttggaaaaggaa
aaccctgaaaagaggaagaacagcactcagccagagaaagagagtaatttggaccgtctg
aatgaacaaggaaattttaaaagtctgtctcaatcttccaaagaggctagaacatcagat
aaacatgattccactcgtgcttcctcaaataaagacttcactcccaatagagacaaaaaa
actgactatgacaccagagagtattcaagttccaaacgtagagatgaaaagaatgaatta
acaagaagaaaagactctccttcccggaataaagattctgcatctggacagaaaaataag
ccaagggaagagagagatttgcctaaaaaaggaacaggagattccaaaaaaagtaattct
agtccctcaagagacagaaaacctcatgatcacaaagccacttatgatactaaacggcca
aatgaagagataaaatctgtagataaaaatccttgtaaggatcgtgagaagcatgtatta
gaagcaaggaacaataaagagtcaagtggcaataaactactttatataattaaccctcca
gagacacaggttgaaaaagagcagattactgggcaaattgacaagaatactgtcaagcct
aaaccccagttaagtcattcctctagactttcctctgacttaactagagaaactgatgaa
gctgcttttgaaccagactataatgaaagtgacagtgaaagtaatgtttctgtaaaagaa
gaggaaacttcaggaaacatttctaaggacctgaaagataaaatagtggagaaagcgaaa
gagatcctggacacagcagcagtcgtccaggtgggcataagcaggaaccagagccacagc
agccccagcgtcagccccagcagaagccacagtccttctggaagccagacccgaagccac
agtagcagtgccagctcagcagaaagtcaggacagcaagaagaagaagaaaaagaaggaa
aagaaaaaacacaagaaacataaaaagcataagaagcataagaaacatgcaggcactgaa
gtggaattggaaaaaagccaaaaacacaaacacaagaaaaagaagtcaaagaagaacaaa
gataaagagaaggagaaggagaaagatgaccaaaaagtgaaatctgtcactgtgtaa
DBGET
integrated database retrieval system
