Pongo abelii (Sumatran orangutan): 100440303
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Entry
100440303 CDS
T01416
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03015
mRNA surveillance pathway
pon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100440303 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
100440303 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100440303 (PABPC4L)
03041 Spliceosome [BR:
pon03041
]
100440303 (PABPC4L)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100440303 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
100440303 (PABPC4L)
Spliceosome [BR:
pon03041
]
Complex C
Other components
Complex C specific factors
100440303 (PABPC4L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_7
RBD_DEAH11
RRM_occluded
RRM_MUD2_C
RRM_10
RRM_MARF1
RRM_3
RBD_RDR6
RRM_ACIN1
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
100440303
NCBI-ProteinID:
XP_024101936
Ensembl:
ENSPPYG00000034327
UniProt:
A0A2J8XP83
LinkDB
All DBs
Position
3:complement(155914047..155916159)
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AA seq
370 aa
AA seq
DB search
MNVAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQ
LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA
ELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKNL
DDTIDDEKLRNEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK
PLSIALAQRH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgcatggcctccctgtatgtgggtgacttacatgcagat
gtcaccgaggacctgctgttcaggaagttcagcactgtggggcctgtgctgtccatccgc
atttgcagggaccaggtcacccgccgctctctgggctatgcctacgtgaacttcttgcag
ctggctgatgcccagaaggcgctggacacaatgaactttgacatcataaaaggcaaatcc
atccgtctcatgtggtctcagcgcgatgcctacttgaggagatctggaattgggaacgtg
ttcatcaagaatctggacaaatctatcgataacaaaaccctttatgaacatttttcagct
tttggaaagatcctttcctccaaagtgatgagtgatgatcaaggctccaagggctatgca
tttgtgcactttcagaaccagagtgctgcagacagggccattgaggagatgaatggaaaa
ctactcaagggctgcaaggtgtttgttggcagattcaaaaaccgaaaagatcgtgaagct
gaactcagaagcaaagccagtgaattcaccaatatttacatcaaaaactttggcggtgac
atggatgatgagagattgaaggacgttttcagcaaatatggcaaaactctgagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaagaaagctgttgaagaaatgaatggaagggacataaatgggcagctgatt
tttgtaggccgggcgcaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgag
cagctgaaaagggaacgaatttgtgggtgccagggggtaaagctctatattaagaacctt
gatgacaccattgatgatgaaaaactacgaaacgagttttcttcatttggatcaattagc
agagttaaggtaatgcaggaagagggacagagcaaagggtttggcttgatctgcttctcc
tctcctgaggatgctactaaagcaatgactgagatgaatggccgcatcttgggctccaaa
cctcttagcattgccttggcccagagacactag
DBGET
integrated database retrieval system
