Pongo abelii (Sumatran orangutan): 100441015
Help
Entry
100441015 CDS
T01416
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pon04142
Lysosome
pon04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
100441015 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100441015 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
100441015 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pon02000
]
100441015 (NPC1)
Transporters [BR:
pon02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
100441015 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
100441015
NCBI-ProteinID:
XP_024091594
Ensembl:
ENSPPYG00000009064
UniProt:
H2NW18
LinkDB
All DBs
Position
17:complement(37728556..37782914)
Genome browser
AA seq
1277 aa
AA seq
DB search
MTARGLALGLLLLLLCPAQVFSQSCVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQ
ELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKD
ADACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSC
QDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMVFLLVFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGEASCCDPVSAAFEGCLRRLFTRWGSFCVRNPGCVIFFSLVF
VTACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDQHFGPFFRTEQLIIRAPLTDKHTY
QPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVTLQDICLAPLSPYNTNCT
IMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYKNLNLT
ISFTAERSIEDELNRESDSDVFTIVISYAIMFLYISLALGHIKSCRRLLVDSKVSLGIAG
ILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETL
DQQLGRVLGEVAPSMFLSSFSETVAFFLGALSMMPAVHTFSLFAGLAVFIDFLLQITCFV
SLLGLDIKRQEKNRLDIFCCVRGAEDGTSVQASESYLFRFFKNSYSPLLLKDWMRPIVIA
IFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYVVDYFKSISQYLHAGPPVYFVLEEGHDYT
SPKGQNMVCGGMGCNNDSLVQQIFNAAQMDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVD
NITDQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYS
SAVNILGNGTRVGATYFMTYHTVLQTSADFIDALKKARLVASNVTETMGINGSAYRVFPY
SVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALAHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKSC
ATEERYKGTERERLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcgcggcctggcccttggcctcctcctgctgctactgtgtccagcgcaggtg
ttttcacagtcctgtgtttggtatggagagtgtggaattgcatatggagacaagaggtac
aattgcgaatattctggcccaccaaaaccattgccaaaggatggatatgacttagtgcag
gaactctgtccaggattcttctttggcaatgtcagtctctgttgtgatgttcagcagctt
cagacactaaaagacaacctgcagctgcctctacagtttctgtccagatgtccatcctgt
ttttataacctactgaacctgttttgtgagctgacatgtagccctcgacagagtcagttt
ttgaatgttacagctactgaagattatgttgatcctgttacaaaccagacgaaaacaaat
gtgaaagagttacagtactacgtcggacagagttttgccaatgcaatgtacaatgcctgc
cgggacgtggaggccccctcaagtaatgacaaggccctgggactcctttgtgggaaggac
gctgatgcctgtaatgccaccaactggattgaatacatgttcaataaggacaatggacag
gcaccttttaccatcactcccgtgttttcagattttcctgtccatgggatggagcccatg
aacaatgccaccaaaggctgtgacgagtctgtggatgaggttacagcgccgtgtagctgc
caagactgctctattgtctgtggccccaagccccagcccccacctcctcctgctccctgg
acgatcctcggcttggacgccatgtatgtcatcatgtggatcacctacatggtgtttttg
cttgtgttttttggagcattttttgcagtgtggtgctacagaaaacggtattttgtctcc
gagtacactcccatcgatagcaatatagctttttctgtcaatgcaagtgacaaaggagag
gcgtcctgctgtgaccctgtcagtgcagcatttgagggctgcttgaggcggctgttcaca
cgctgggggtctttctgcgtccgaaaccctggctgtgtcattttcttctcgctggtcttc
gttactgcgtgttcgtcaggcctggtgtttgtccgggttacaaccaatccagttgacctc
tggtcagcccccagcagccaggctcgcctggaaaaagagtactttgaccagcactttggg
cctttcttccggacggagcagctcatcatccgggcccctctcactgacaaacacacttac
cagccgtacccttcgggagccgatgtaccctttggacctccgcttgacatacagatactg
caccaggttcttgacttacaaatagccatcgaaaacattactgcctcttataacaatgag
actgtgacacttcaagacatctgcttggcccctctttcaccgtataacacgaactgcacc
attatgagtgtgttaaattacttccagaacagccattccgtgctggaccacaagaaaggg
gacgacttctttgtgtatgctgattaccacacgcactttctgtactgcgtacgggctcct
gcctctctgaatgatacaagtttgctccatgacccttgtctgggtacgtttggtggacca
gtgttcccgtggcttgtgttgggcggctatgatgatcaaaactacaacaacgccactgcc
cttgtgattaccttccctgtcaataattactataatgatacagagaagctccagagggcc
caggcctgggaaaaagagtttattaattttgtgaaaaactacaagaatctcaatctgacc
atttccttcactgctgaacgaagtattgaagatgaactaaatcgtgaaagtgacagtgat
gtcttcaccattgtaattagctatgccatcatgtttctgtatatttccctagccttgggg
cacatcaaaagctgtcgcaggcttctggtggattcgaaggtctcactaggcatcgcgggc
atcttgatcgtgctgagctcggtggcttgctccttgggtgtcttcagctacattgggttg
cccttgaccctcattgtgattgaagtcatcccattcctggtgctggctgttggagtggac
aacatcttcattctggtgcaggcctaccagagagatgaacgtcttcaaggggaaaccctg
gatcagcaactgggcagggtcctaggagaagtggctcccagtatgttcctgtcatccttt
tctgagactgtagcgtttttcttaggagcattgtccatgatgccagccgtgcacacgttc
tctctctttgcgggattggcagtcttcattgactttcttctgcagattacctgtttcgtg
agtctcttggggttagacattaaacgtcaagagaaaaatcggctagacatcttttgctgt
gtcagaggtgctgaagatggaacaagcgtccaggcctcagagagctatttgtttcgcttc
ttcaaaaactcctattctccacttctgctaaaggactggatgagaccaattgtgatagca
atatttgtgggtgttctgtcattcagcatcgcagtcctgaacaaagtagatattggattg
gatcagtctctttcgatgccagatgactcctacgtggtggattatttcaaatccatcagt
cagtacctgcatgcgggtccgcctgtgtactttgtcctggaggaagggcacgactacact
tctcccaaggggcagaacatggtgtgcggcggcatgggctgcaacaacgattccctggtg
cagcagatatttaacgcggcgcagatggacaactatacccgaataggcttcgccccctcg
tcctggatcgatgattatttcgactgggtgaagccacagtcatcttgctgtcgagtggac
aatatcactgaccagttctgcaatgcttcagtggttgaccctgcctgcgtccgctgcagg
cctctgactccggaaggcaaacagaggcctcagggtggagacttcatgagattcctgccc
atgttcctttcggataaccctaaccccaagtgtggcaaagggggacatgctgcctatagt
tctgcagttaacatccttggcaatggcaccagggtcggagccacatacttcatgacctac
cacaccgtgctgcagacctctgctgactttattgacgctctgaagaaagcccgacttgta
gccagtaatgtcaccgaaaccatgggcattaatggcagtgcctaccgagtatttccttac
agtgtgttttatgtcttctacgaacagtacctgaccatcattgacgacactatcttcaac
ctcggtgtgtccctgggcgcgatatttctggtgaccatggtcctcctgggctgtgagctc
tggtctgcagtcatcatgtgtgccaccatcgccatggtcttggtcaacatgtttggagtt
atgtggctctggggcatcagtctgaacgctgtatccttggtcaacctggtgatgagctgt
ggcatctccgtggagttctgcagccacataaccagagcattcacggtgagcacaaaaggc
agccgcgtggagcgcgcggaagaggcactcgcccacatgggcagctccgtgttcagtgga
atcacacttacaaaatttggagggattgtggtgttggcttttgccaaatctcaaattttc
cagatattctacttcaggatgtatttggccatggtcttattgggagccactcatggatta
atatttctccccgtcttactcagttacatagggccgtcagtaaataaagccaaaagttgt
gccactgaagagcgatacaaaggaacagagcgcgaacggcttctaaatttctag
DBGET
integrated database retrieval system
