Pongo abelii (Sumatran orangutan): 100441233
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Entry
100441233 CDS
T01416
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03013
Nucleocytoplasmic transport
pon03015
mRNA surveillance pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100441233 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
100441233 (ACIN1)
03015 mRNA surveillance pathway
100441233 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100441233 (ACIN1)
03041 Spliceosome [BR:
pon03041
]
100441233 (ACIN1)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100441233 (ACIN1)
Spliceosome [BR:
pon03041
]
Complex C
Other components
EJC/TREX
100441233 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100441233
NCBI-ProteinID:
XP_024087283
Ensembl:
ENSPPYG00000005657
LinkDB
All DBs
Position
15:complement(26586090..26622696)
Genome browser
AA seq
1348 aa
AA seq
DB search
MWRRKHPRTSGGTRGVLSGNRGVEYGSGRGHLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLS
EGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDEEDEDDDEGQKSREAPIL
KEFKEEGEEIPRVKPEEMMDERPKTRSQEQEVLERGGRVTRSQEEARKSHLTRQQQEKEM
KTTSPLEEEEREIKSSQGLKEKSKSPSPPRLTEDLKKASLVVQPEQTASEEETPPPLLTK
EASSPPPHTQLHSEEEIEPMEGPAPPVLIQLSPPNTDAETRELLVSQHTVQLVGGLSPLS
SPSDTKAESPAEKVPEESVLPLVQKSTLADYSAQKDLEPESDRSAQPLPLKIEELALAKG
ITEECLKQPSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGS
RSHSPLRSKQRDVAQARTHANPRGRPKMGSRSTSESRSRSRSRSRSRSRSRSRSASSNSR
KSLSPGVSRDSSTSYTETKDPSSGQEVATPPVPQLQVCEPKERTSTSSSSVQARRLSQPE
PAEKHVTQRLQPERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESERIHHTVEEKEEVT
MDTSENRPENDVPEPPMPIADQVSNDDRPEGSVEDEEKKESSLPKSFKRKISVVSATKGV
PAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHAD
DSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVPPQ
VSVEVALPPPAEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNI
VHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVK
WPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKTEEQGIPRPLHPPPPPPVQPPQHPRA
EQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKE
KKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRK
EQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERG
RERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacatccgaggacatccggaggaacccggggagttctgagtggtaat
cgaggggtagagtatggcagtgggcggggtcatctcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggtgaggaaatgagccagaacagtttcataaaacagtat
ctggaaaagcagcaggagctacttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcgcccagaaaaagctcctcaatttctgaagagaaaggtgactctgatgatgagaaa
ccaaggaaaggagaaagacgatcatctagggtcagacaggcaagagcagctaaactctct
gagggcagccagcctgctgaggaggaagaggatcaagaaacaccttccagaaacctaagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaggaggaggaggaggaagaa
gaagatgaagaagacgaagatgatgatgagggacaaaaatctagggaggcaccaatcctg
aaagagtttaaggaagaaggggaagagattcctagagtaaaaccagaggagatgatggat
gagagacccaaaacaagatcccaggaacaggaggtgttagagagaggagggagagttaca
agatcccaggaagaggctagaaaaagtcatctgaccagacagcagcaggagaaggaaatg
aaaacaacatctccccttgaggaggaagaaagagaaataaaatcttcacaaggcttaaag
gaaaaatcgaagtctccttcccctcctcgactgactgaagatctaaagaaggcctcactt
gtagtgcagccagagcaaactgccagcgaggaggagactcctccacctttacttacgaag
gaagcatcttctccaccacctcatacacaactccatagtgaagaagaaatagagcccatg
gaaggcccagccccccctgtcctcattcagttatctcctcctaatacagatgctgagacc
agggagctattagtatctcagcatactgtccagttggtaggaggcctgtctcctttgtca
agtccttcagacaccaaagcagaatctccagcagagaaagtgccagaggagagtgtcctg
cctctggttcagaaaagcacattggctgactactcagcccagaaggatcttgaacctgag
tcggacagatctgctcagcccctccctctaaaaattgaggaattagcactggccaaagga
atcactgaagaatgtctgaaacagccatctttggaacagaaggaaggcagaagagcttct
catacccttctcccaagccacagattgaaacagtcagctgattcatcctctagccggtcc
tcctcatcttcctcctccagttctagatcaagatctcgctctcctgacagttcaggttct
cggtctcattcaccactcagatccaagcagagagatgtagcccaggcacgtactcatgcc
aaccctcgtggtagacccaagatgggctccagatcaacatcagagtccagatcaaggtca
cgttcgcgttcacgttcacgttctcgttctcgttctcgttcagcatcaagcaacagcaga
aaatctctgagccctggagtctccagggacagcagcaccagctatactgaaaccaaagat
ccctcttctggtcaggaggttgcaactccaccagtgccacaactgcaggtctgtgagcca
aaggagaggacttccacctcctcatcctctgtccaagcaaggcgtctgagtcagcctgaa
ccagctgaaaagcatgtgacccagaggttacagcctgagcgggggagcccaaagaagtgt
gaagctgaagaggcagagccaccagctgccacacagccccaaacctcagagactcagacc
tctcatctgccagaatcagaaagaattcatcacactgttgaggagaaggaggaagtgacc
atggacacaagtgaaaacagacctgaaaatgatgttccagaacctcccatgcctattgca
gaccaagtcagcaatgatgaccgcccggagggcagtgttgaagatgaggagaagaaagag
agctcgctgcccaaatcattcaagaggaagatctccgttgtctcagctaccaagggggtg
ccagctggaaacagtgacacagaggggggccagcctggtcggaaacgacgctggggagcc
agcacagccactacacagaagaaaccttccatcagtatcaccactgaatcactaaagagc
ctcatccccgacatcaaacccctggcggggcaggaggctgttgtggatcttcatgctgat
gactctcgcatctctgaggatgagacagagcgtaatggcgatgatgggacccatgacaaa
gggctgaaaatatgccggacagtcactcaggtagtacctgcagagggccaggagaatggg
cagagggaagaagaggaagaagagaaggaacctgaagcagaacctcctgtacctccccag
gtgtcagtagaggtggccttgcccccacctgcagagcatgaagtaaagaaagtgacttta
ggagataccttaactcgacgttccattagccagcagaagtccggagtttccattacaatt
gatgacccggtccgaactgcccaggtgccctccccgccccggggcaagattagcaacatt
gttcatatctccaatttggtccgtcctttcactttaggccagctaaaggagttgttgggg
cgcacgggaaccttggtggaagaggccttctggattgacaagatcaaatctcattgcttt
gtaacgtactcaacagtagaggaagctgttgccacccgcacagctctgcatggggtcaaa
tggccccagtccaatcccaaattcctttgtgctgactatgctgagcaagatgagctggat
tatcaccgaggcctcttggtggaccgtccctctgaaactaagacagaggagcaggggata
ccacggcccctgcaccccccacccccacccccggtccagccaccacagcacccccgggca
gagcagcgggagcaggaacgggcagtgcgggaacagtgggcagaacgggaacgggaaatg
gagcggcgggagcggactcgatcggagcgtgaatgggatcgggacaaagttcgagaaggg
ccccgttcccgatcaaggtcccgtgaccgccgccgcaaggaacgtgcgaagtctaaagaa
aagaagagtgagaagaaagagaaagcccaggaggaaccacctgccaagctgctggatgac
cttttccgaaagaccaaggcagctccctgcatctattggctcccactgactgacagccag
atcgttcagaaggaggcagagcgggccgaaagggccaaggagcgggagaagcggcgaaag
gagcaagaagaagaagagcaaaaggagcgggagaaggaagccgagcgggaacggaaccga
cagctggagcgagagaaacgtcgggagcacagtcgggagagggacagggagagagagaga
gaaagggagcgagacaggggggaccgagatcgggatagggaaagggaccgagaacgaggc
agggaaagggatcgcagggacaccaagcgccacagcagaagccggagtcggagcacacct
gtgcgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
