KEGG   Pongo abelii (Sumatran orangutan): 100441453
Entry
100441453         CDS       T01416                                 
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X4
  KO
K27498  focadhesin
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100441453 (FOCAD)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     100441453 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 100441453
NCBI-ProteinID: XP_009242667
Ensembl: ENSPPYG00000019187
LinkDB
Position
13:complement(37161621..37481160)
AA seq 1801 aa
MSDDIRKRFEFPNSLIQSQAAGHLIAAVLKENGFSEKIYQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGG
EKNIQRVYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILQQQILQLCCDIVPCLQIKDLIQT
TEAMMFIEEIYLSLLRHPVFWKIQLTQMTLQLLCVGEVSLKITGECSSSIHLLEHSVELL
KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLFSVTEDQKIPKSSLLLVMPILQILS
STALEDCISVDEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLVCPVTSMYGSVFTAWR
ILEVMTDSSAASDWLASVESLLPITTVIPVPAFLLLAHLLVEDKGQNLHQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCIGQILRVIQLLGTTPRLR
AVTLRLLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLANFSAG
EHTILHLPEKIRPEIPIPEELDDDEDDEDVDLSVPGSCYLKLLSLTPPLVLPALEEFFTS
LVKQEMVNMPRGIYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGGMLFC
YDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMNRA
YHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNA
LLALSSLAVVVSRHEASLSSDSDGLLEVQPNFLSMKEWVSMILDTLLVIVDSHYQPRGQL
LSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSAD
ESQAVQIHMGLALGMFLSRLCEEKLSDICGQEMNLLLMKSLDALENCCFDTSLEYNTGCI
LGVGLVLSLMSHSSQMQSCVHVTALLRKLSAYLDDSGSQSRTFQEVLAYTLSCVCTSAFS
AGIIEATEAEDVMNKLRLLVENSQQTSGFALALGNVVHGLSVCGHGKAEDLGSKLLPAWI
RIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISV
SGVIGLQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPE
SVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQ
NAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKAASPL
GNPELCPSALQGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCL
LEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMI
LHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFQNTALDEALDFFLLIFATA
VVAWADHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTVQEVLTLLPNSMALL
LQKEPWKEETQKFIDWLFSIMESPKEALSAKSRDLLKATLLSLRVLPEFKKKAVWTRAYG
W
NT seq 5406 nt   +upstreamnt  +downstreamnt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gcgggtcatcttattgctgcagtcctaaaggagaatggtttttcagaaaagatttaccaa
tctacaaatcagactcctgctttgaacttgctgtgggagaagtgttgcagtgacaatgta
gtggttcgaacagcctgctgtgaaggtctggtggcactcgttgctcaggatcatgcagag
ttcagctatgttctcaatgggatactcaacttgattccatcaaccagaaatacacatggc
ttgataaaagccattatgaaattactacaaatgcaagctcttaaggaaggacaaggtggg
gaaaagaatattcagagggtatataccattagaaatcatcctcatcctttgatcactgtg
cttgaacacagacctgattgttggccagtgtttttgcagcagctgacagcatttttccag
cagtgccctgaaaggtcagaagtttcatgcattcaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttacaagaatatgctaaactccgactagccctgctgaaa
gtcttacttcaaccccaggttctttgtgacaaggatcaaccatcaatactgcaacagcag
atacttcaactgtgttgtgacatagttccatgtttgcagataaaagatttgatacagaca
acagaagcgatgatgtttattgaggaaatatatttaagccttttgcgtcatcctgttttc
tggaaaattcagcttacccagatgactcttcagctgctgtgtgtcggtgaagtcagctta
aagataactggtgaatgttcatcttcaattcacctcttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttactacttctacagact
ccagcaagtcagcagaagccaatcttaaatctagctttgaagctcttctctgttactgag
gatcagaaaatcccaaagtcctctctgctgctagtgatgccaattctgcagatactgtct
tctactgccttggaagactgtatatctgtggatgaagaaggtccctctaggcagcagttg
gctctaaaccttttggaaatgatacagcaggaatgttacagagatgaccaccaaaagctc
tcctacaagcttgtgtgccctgtaaccagtatgtatggttcagtatttacagcctggagg
attcttgaagtaatgacagactcctctgctgcaagtgactggttggcttcagtagagtca
ttgcttcctattactactgtgatccctgtgcctgcctttcttctgctggctcacctcctt
gttgaagacaaaggacaaaatcttcaccaaatactcaaggtcactacagaattagcccaa
gcagattcctcccaggtgccaaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctatattatataatgatatattgtatactttacctaagcttggtgttcacaag
gtgtgtataggacaaattctacgagtaatacaactgcttggaaccacaccacgactaaga
gctgtcactttgcgcttgctgacatctttgtgggaaaagcaggaccgagtctatcctgaa
ctgcagcgtttcatggctgtgtctgatgtaccttctctttcggtgggcaaggaagtccaa
tgggagaaactgattgcaaaagcagcatcaatcagagatatatgtaagcagaggccatat
caacatggtgcagatatgctggcagctatttctcaggtgttgaatgaatgcaccaagcct
gatcaagctactccagcagccttggtattacaaggtcttcatgcactctgtcaagctgag
gttgtttgcattcgctccacttggaatgctctctctccaaagctgagttgtgacacaaga
cctctcattctgaagacactgagtgaactattttctctagttccttccttaacagtcaat
acaactgaatatgagaattttaaagttcaagtcctcagcttcctctggactcatactcaa
aacaaggacccaattgtggcaaatgctgcatatagatccctggccaattttagtgcagga
gaacacaccattcttcatctgcctgaaaagataagaccagaaattcccattcctgaagag
ttagatgatgatgaagatgatgaggatgtggatctttcagttcctggctcttgctatctc
aaactgttgtcactcactccccctttggttttaccagctttggaggaattttttacatca
cttgtgaagcaagaaatggtgaatatgcctcgtgggatatatcactctgcattaaaagga
ggtgtccgctcagaccaaggaaagactgtagcaggaatccccaattttatattgaaaatg
tatgaaacaaacaagcaaccaggattgaaacctggccttgcaggtggtatgttattttgc
tatgatgtttccatgtatcagagtaaagatggaaaaccattgaatagactgatggccagc
agagggcgaagtttcaagcagacatcacttgctcttgtacatgaggttcatatccagctt
tcagagtggcaccgtgcgatttttcttccacaggcctggcttgcatacatgaatcgagct
tatcatgccattttacagggaagactaggagagctggagttgcagttaaaacatggaaaa
gaagaacctgaggaggtgcagtacaaaaaaagcacagcttggctctgggttagagacatg
ctgactgatgagatcaccaaggcagctgcaaaggagagtccggtagtgaaaggcaatgcg
ctgttagctctaagcagccttgctgtcgtcgtatctagacatgaagccagcctctcctca
gactctgacgggctcctggaggttcaacctaatttcctttcaatgaaagagtgggtttcc
atgatacttgatacactcttggtcattgtggatagccattaccaacccagagggcaactt
ctctcctggttttattataagtcctattctggtgaaaacacagctagtgccattgcccgt
tctgctgccgccacggctttgtctctccttgtgccagttttcattatctcttgcaaagag
aaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaaccaagtgctgat
gagtctcaagccgtgcaaatccacatgggccttgctttagggatgtttctctctcgcttg
tgtgaagagaaactcagtgatatatgtggccaagagatgaaccttcttctgatgaagtcg
ttggatgccctggaaaattgctgctttgacactagtcttgaatacaacacgggctgtata
ttgggagttggacttgttctgtccctcatgagtcacagcagccaaatgcagtcctgcgtt
cacgtgacagcattgcttcggaagctgtctgcatacctagatgacagtgggagccagagc
agaacgtttcaggaggtccttgcctacacacttagctgtgtatgtacatcagcgttcagt
gctggaattattgaggctacagaggctgaggatgttatgaacaagcttcgactgttagtg
gagaatagccagcagacttcaggttttgccctggctttaggaaacgtagttcatggattg
tctgtgtgtggacatggaaaagctgaagacttgggcagcaaactactccctgcctggatc
agaattgttctaacagagggcactcccacaatgctttgtctggcagctcttcatggcatg
gtggccctggtaggctctgaaggggatgtaatgcagctgaaatcagaagccatccagacc
tctcattttcaaggcagacttaatgaagtcattagaaccttaactcaggtcattagtgtc
tctggggtgattggtctccagtcaaatgcagtctggcttcttggacatcttcatctatct
actctatcctcaagtcaaagtagagcctctgttcctactgactatagctatttgcctgaa
agcagttttattggagcagctattggcttcttcattacaggaggaaaaaaaggtcctgaa
tctgtgcctccttcccttcttaaagtagtgatgaaacccatagcaactgttggagaaagc
taccaatatcctcctgtgaactgggctgcacttctctctccacttatgaggctaaatttt
ggtgaagagatccagcaactgtgccttgaaattatggtgacccaggcacagtcatcccag
aatgcagctgcactattgggcttgtgggtgacaccaccactgatccacagtctgagtctg
aataccaagagatatctcctgatatctgcacctctgtggataaaacacatctctgatgaa
cagatcctgggttttgttgaaaatttaatggtggcagtttttaaagcagcttccccactt
ggaaatcctgagctatgcccgagtgctttacagggtctgagccaggccatgaaactgccc
agccctgctcaccacctctggagtctgctctctgaagctactgggaaaatttttgacctc
ctgccaaataagattcggagaaaggatctagagctgtatatcagcatagcaaaatgcctc
ttagaaatgacagatgatgatgccaatcggatcgcccaggttactaagagcaacatagaa
aaggctgcctttgtcaaactgtacttagtctctcaaggacgattccccttggtgaacctg
accgatatgctgagtgttgctgtgcagcaccgtgagaaagaggtgttggcctggatgatt
ctgcacagcttataccaggcacggattgtgagccatgccaacacgggcgttttgaagaga
atggagtggctcttggaactgatgggttatattagaaatgttgcgtaccagtcaacatcc
tttcagaatacggctcttgatgaggctttggacttcttcttgctgatatttgcaaccgca
gtggttgcatgggccgaccacactgcccctctcctccttggtctcagtgccagttggttg
ccatggcatcaggagaatggcccggctgggccagtaccaagcttccttggcaggagtcca
atgcacagggtcactgtgcaggaggttctcactctccttcccaatagcatggctctgctg
ctgcagaaagagccatggaaggaagagacccagaagttcattgactggctattcagcatc
atggaaagccctaaagaagccctctcagcaaagtccagggatcttttgaaagccaccctg
ctgtccttgagagttctcccagagtttaagaagaaagctgtatggaccagagcgtatggt
tggtga

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