Pongo abelii (Sumatran orangutan): 100442500
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Entry
100442500 CDS
T01416
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon05016
Huntington disease
pon05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100442500 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
100442500 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100442500 (HTT)
04131 Membrane trafficking [BR:
pon04131
]
100442500 (HTT)
03029 Mitochondrial biogenesis [BR:
pon03029
]
100442500 (HTT)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100442500 (HTT)
Membrane trafficking [BR:
pon04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100442500 (HTT)
Mitochondrial biogenesis [BR:
pon03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100442500 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
100442500
NCBI-ProteinID:
XP_024101641
Ensembl:
ENSPPYG00000014551
LinkDB
All DBs
Position
3:3111457..3280445
Genome browser
AA seq
3132 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQPPPPPPPPPPPPQLPQPPPQAQPLLPQQQPPP
PPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPEFQKLLGIAM
ELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWR
FAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIK
VLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEDEHSTL
LILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQHQD
HNVVTGALELLQQLFRTPPPELLQTLTTVGGIGQLTAAKEESGGRSRSGSIVELIAGGGS
SCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSALAASVKDEISGELAASSGVSTPGS
AGHDIITEQPRSQHTLQADSVDLAGCDLTSSATDGDEEDILSHSSSQVSAVPSDPAMDLN
DGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQDEDEEATGIL
PDEASEAFRNSSMALQQAHLLKNMSHSRQPSDSSVDKFVLRDEATEPGDQENKPCRIKGD
IGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVGAAVALHPES
FFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSILSRSRFHVGD
WMGTIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRHCAMSLCSSSYSELGLQL
IIDVLTLRNSSYWLVRTELLETLAEMDFRLVSFLEAKAENLHRGAHHYTGLLKLQERVLN
NVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHET
QPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCEAL
CLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFPLDLSAHQDA
LILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQLFSHLLKVI
NICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPKKGSEASAA
SRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRS
ALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFD
GLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDTSG
WFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVL
DLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERY
HSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKE
VVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHE
ALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAILRVLISQSTE
DIVLSRIQELSFSPYLISCPVINRLRDGDSNSTLEEHSEGKQIKNLPEETFSRFLLQLVG
ILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFRSDGCG
GSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKRHSLSSTKLL
SPQMSGEEEDSDLAAKLGICNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLIS
LSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVL
TLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRIQEYLQSSGLA
QRHQRLYSLLDRFRLSSMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWYIHLVKSQCW
TRSDSALLEGAELVNRIPAEDMSAFMMNSEFNPSLLAPCLSLGMSEISGGQKSPLFEAAR
EVTLARVSGTVQQLPAVHHVFQPGLPAEPAAYWSKLNDLFGDAALYQSLPTLARALAQYL
VVVSKLPSHLHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLDCCCLALQLP
GLWSVVSSTEFVTHACSVIHCVHFILEAVAVQPGEQLLSPERRTNTPKAIREEEQVDPNT
QNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAFLTSVLRNIIISLARLPLVNSYTR
VPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWAT
LLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQ
PRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGA
LISHEKLLLQINPERELGSMSYKLGQVSIHSMWLGNSITPLREEEWDEEEEEEADAPAPS
SPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPAILISEVVRSLLVVSDL
FTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKAAAVLGMDKAVAEPVSRLLEST
LRSSHLPSRVGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHCVNIHSQQHVL
VMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQ
LSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSDPNPAAPDSES
VIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGEFLSNQQPYPQ
FMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMATWSLSCFFVSASTSPWVA
AILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGSPYHRLL
TCLRNVHKVTTC
NT seq
9399 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaagtccttccagcagcag
cagcagcagcagcagcagcaacagccgccaccgccgccgccgccgccgccgccgcctcct
cagcttcctcagccgccgccgcaggcacagccgctgctgcctcagcagcagccgcccccg
ccgccgcccccgccgccacccggcccggctgtggctgaggagccgctgcaccgaccaaag
aaagaactttccgctaccaagaaagaccgtgtgaatcattgtctgacgatatgtgaaaac
atagtggcacagtctgtcagaaattctccagaatttcagaaacttctgggcatcgctatg
gaactttttctgctgtgcagtgatgacgcagagtcagatgtcaggatggtggctgacgaa
tgcctcaacaaagttatcaaagctttgatggattctaatcttccaaggttacagctcgag
ctctataaggaaattaaaaagaatggtgcccctcggagtttgcgtgctgccctgtggagg
tttgctgagctggctcacctggttcggcctcagaaatgcaggccttacctggtgaacctt
ctgccgtgcctgactcgaacaagcaagagacctgaggaatcagtccaggagaccttggct
gcagctgttcccaaaattatggcttctttcggcaattttgcaaatgacaatgaaattaag
gttttgttaaaggccttcatagcgaacctgaagtcaagctcccccaccattcggcggaca
gcggcaggatcagcagtgagcatctgccagcactcaagaaggacacaatatttctatagt
tggctactaaatgtgctcttaggcttactggttcctgttgaggatgaacactccactctg
ctgattcttggcgtgctgctcaccctgaggtatttggtgcccttgctgcagcagcaggtc
aaggacacaagcctgaaaggcagctttggggtgacacggaaagaaatggaagtctctcct
tctgcagagcagcttgtccaggtttatgaactgacgttacatcatacacagcaccaagac
cacaatgttgtgaccggagccctggagctgttgcagcagctcttcagaacgcctccaccc
gagcttctgcaaaccctgaccactgtcgggggcattgggcagctcaccgctgctaaggag
gagtctggtggccgaagccgtagtgggagcatcgtggaacttatagctggagggggttcc
tcatgcagccctgtcctttcaagaaaacaaaaaggcaaagtgctcttaggagaagaagaa
gccttggaggatgactctgaatcgagatcggatgtcagcagctctgccttagcagcctca
gtgaaggatgagatcagtggagagctggctgcttcttcaggggtttccactccaggatca
gcaggtcacgacatcatcacagagcagccacgatcacagcacacgctgcaggcggactca
gtggatctggccggctgtgacttgacaagctctgccactgatggggatgaggaggatatc
ttgagccacagctccagtcaggtcagcgccgtcccatctgaccctgccatggacctgaat
gatgggacccaggcctcctcgcccatcagcgacagctcccagaccaccactgaagggcct
gattcagctgtcaccccttcagacagttctgaaattgtgttagacggtaccgacaaccag
tatttgggcctgcagattggacagccccaggatgaagatgaggaagccacaggtattctt
cctgatgaagcctcggaggccttcaggaactcttccatggcccttcaacaggcacattta
ttgaaaaacatgagtcacagcaggcagccttctgacagcagtgttgataaatttgtgttg
agagatgaagctactgaaccgggtgatcaagaaaacaagccttgccgcatcaaaggtgac
atcggacagtccaccgatgatgactctgcacctcttgtccattgtgtccgccttttatct
gcttcgtttttgctaacagggggaaaaaatgtgctggttccggacagggatgtgagggtc
agcgtgaaggccctggccctcagctgtgtgggagcagctgtggccctccacccagaatct
ttcttcagcaaactctataaagttcctcttgacaccacggaataccctgaggaacagtat
gtctcagacatcttgaactacatcgatcatggagacccacaggttcgcggagccactgcc
attctctgtgggaccctcatctgctccatcctcagcaggtcccgcttccacgtgggagat
tggatgggcaccattagaaccctcacaggaaatacattttctttggcggattgcattcct
ttgctgcggaaaacactgaaggatgagtcttctgttacttgcaagttagcttgtacagct
gtgaggcattgtgccatgagtctctgcagcagcagctacagtgagttaggactgcagctg
atcatcgatgtgctgactctgaggaacagttcctattggctggtgaggacagagcttctg
gaaacccttgcggagatggacttcaggctggtgagctttttggaggcaaaagcagaaaac
ttacacagaggggctcatcattatacagggcttttaaaactgcaagaacgagtgctcaat
aatgttgtcatccatttgcttggggatgaagaccccagggtgcgacatgttgccgcagca
tcattaattaggcttgtcccaaagctgttttataaatgtgaccaaggacaagctgatcca
gtagtggccgtggcaagagatcaaagcagtgtttacctgaaacttctcatgcatgagaca
cagcctccatctcatttctccgtcagcacaataaccagaatatatagaggctataaccta
ctaccaagcataacagatgtcactatggaaaataacctttcaagagttattgcagcagtt
tctcatgaactaatcacatcaaccaccagagcactcacatttggatgctgtgaagctttg
tgtcttctttccactgccttcccagtttgcatttggagtttaggttggcactgtggagtg
cctccactgagtgcctcagatgagtctaggaagagctgtaccgttgggatggccacaatg
attctgaccctgctctcgtcagcttggttcccattggatctctcagcccatcaagatgct
ttgattttggccggaaacttgcttgcagccagtgctcccaaatctctgagaagttcatgg
gcctctgaagaagaagccaacccagcagccaccaagcaagaggaggtctggccagccctg
ggggaccgggccctggtgcccatggtggaacagctcttctcccacctgctgaaggtgatt
aacatttgtgcccacgtcctggatgacgtggctcctggacccgcaataaaggcagccttg
ccttctctaacaaaccccccttctctaagtcccatccgacgaaaggggaaggagaaagaa
ccaggagaacaagcatctgtaccattgagtcccaagaaaggcagtgaggccagtgcagct
tctagacaatctgatacctcgggtcctgttacaacaagtaaatcctcatcactggggagt
ttctatcatcttccttcatacctcaaactgcatgatgtcctgaaagctacacacgctaac
tacaaggtcaccttggatcttcagaacagcacggaaaagtttggagggtttctccgctca
gccttggatgttctttctcagatactagagctggccacactgcaggacattgggaagtgt
gttgaagagatcctaggatacctgaaatcctgctttagtcgagaaccaatgatggccact
gtttgtgttcaacaattgttgaagactctctttgggacaaacttggcctcccagtttgac
ggcttatcttccaaccccagcaaatcacaaggccgagcacagcgccttggctcctccagt
gtgaggccaggcttgtaccactactgcttcatggccccgtacacccacttcacccaggcc
ctcgctgacgccagcctgaggaacatggtgcaggcggagcaggagcacgacacctcggga
tggtttgatgtcctccagaaagtgtctacccagttgaagacaaacctcacgagtgtcaca
aagaaccgtgcagataagaatgctattcataatcacattcgtttgtttgaacctcttgtt
ataaaagctttaaaacagtacacgactacaacatctgtgcagttacagaagcaggtttta
gatttgctggcgcagctggttcagttacgggttaattactgtcttctggattcagatcag
gtgtttattggctttgtattgaaacagtttgaatacattgaagtgggccagttcagggaa
tcagaggcaatcattccaaacatctttttcttcttggtattactatcttatgaacgctat
cattcaaaacagattattggaattcctaaaatcattcagctctgtgatggcatcatggcc
agtggaaggaaggctgtgacacacgccataccagctctgcagcccatagtccacgacctc
tttgtattaagaggaacaaataaagctgatgcaggaaaagagcttgaaacccaaaaagag
gtggtggtgtcaatgttactgagactcatccagtaccatcaggtgttggagatgttcatt
cttgtcctgcagcagtgccacaaggagaatgaagacaagtggaagcgactgtctcgacag
atagctgacatcatcctcccaatgttagccaaacagcagatgcacattgactctcatgaa
gcccttggagtgttaaatacattatttgagattttggccccttcctccctccgtccggtg
gacatgcttttacggagtatgttcgtcactccaaacacaatggcatccgtgagcactgtt
caactgtggatatcgggaattctggccattttgagggttctgatttcccagtcaactgaa
gatattgttctttctcgtattcaggagctctccttctctccatatttaatctcctgtcca
gtaattaataggttaagagatggggacagtaattcaacgctagaagaacacagtgaaggg
aaacaaataaagaatttgccagaagaaacattttcaaggtttctattacaactggttggt
attcttttagaagacattgttacaaaacagctgaaggtggaaatgagtgagcagcaacat
actttctattgccaagaactaggcacactgctaatgtgtctgatccacatcttcaagtct
ggaatgttccggagaatcacagcagccgccactagactgttccgcagtgacggctgtggc
ggcagtttctacaccctggacagcttgaacttgcgggctcgttccatgattaccacccac
ccggccctggtgctgctctggtgtcagatcctgctgcttgtcaaccacactgactaccgc
tggtgggcagaagtgcagcagaccccaaaaagacacagtctgtccagcacaaagttactt
agtccccagatgtctggagaagaggaggattctgacttggcagccaaacttggaatctgc
aatagagaaatagtacgaagaggggctctcattctcttctgtgattatgtctgtcagaac
ctccatgactccgagcacttaacgtggctcattgtaaatcacattcaagatctgatcagc
ctttcccacgagcctccagtacaggacttcatcagtgccgttcatcggaactctgctgcc
agcggcctgttcatccaggcaattcagtctcgttgtgaaaacctttcaactccaactact
ctgaagaaaactcttcagtgcttggaggggatccatctcagccagtcgggagctgtgctc
acgctgtatgtggacaggcttctgtgcacccctttccgtgttctggctcgcatggtggac
atccttgcttgtcgccgggtagaaatgcttctggctgcaaatttacagagcagcatggcc
cagttgccaatggaagaactcaacagaatccaggaataccttcagagcagcgggctcgct
cagagacaccaaaggctctattccctgctggacaggtttcgtctctccagcatgcaagac
tcacttagtccctctcctccagtctcttcccacccgctggacggggatgggcatgtgtca
ctggaaacagtgagtccggacaaagactggtacattcatcttgtcaaatcccagtgttgg
accaggtcagattctgcactgctggaaggtgcagagctggtgaatcggattcctgctgaa
gatatgagtgccttcatgatgaactcggagttcaacccaagcctgctagctccatgctta
agcctagggatgagtgaaatttctggtggccagaagagtcccctttttgaagcagcccgt
gaggtgactctggcccgcgtgagcggcactgtacaacagctccctgctgtccatcacgtc
ttccagcccggcctgcctgcagagccggcggcctactggagcaagttgaatgatctattt
ggggatgctgctctgtatcagtccctgcccactctggcccgggccctggcacagtacctg
gtggtggtctccaaactgcccagtcatttgcaccttcctcctgagaaagagaaggacatc
gtgaaattcgtagtggcaacccttgaggccttgtcctggcatttgatccatgagcagatc
ccgctgagtctggatctccaggcagggctggactgctgctgcctggccctgcagctgcct
ggcctctggagcgtggtctcctccacagagtttgtgacccatgcctgctccgtcatccac
tgtgtgcacttcatcctggaggccgttgcagtgcagcctggagagcagcttcttagtcca
gaaagaagaacgaataccccaaaagccatcagagaggaggagcaagtagatccaaacaca
cagaatcctaagtatatcactgcagcctgtgagatggtggcagaaatggtggagtctctg
cagtcggtgttggccttgggtcataaaaggaatagtggcgtgccggcgtttctcacgtca
gtgctcaggaacatcatcatcagcctggcccgcctgccccttgtcaacagctacacacgt
gtgcccccactggtgtggaagcttggatggtcacccaaaccgggaggggattttggcaca
gcattccctgagatccccgtagagttcctccaggaaaaggaagtctttaaggagttcatc
taccgcatcaacacactaggctggactagtcgtactcagtttgaagaaacttgggccacc
ctccttggtgtcctggtgacgcagcccctcgtgatggagcaggaggagagcccaccagaa
gaagacacagagaggacccagatcaacgtcctggccgtgcaggccatcacctcactggtg
ctcagtgcaatgactgtgcctgtggccggcaacccagctgtaagctgcttggagcagcag
ccccggaacaagcctctgaaagctctcgacaccaggtttgggaggaagctgagcattatc
agagggattgtggagcaagagattcaagcaatggtttcaaagagagagaacattgccacc
catcatttataccaggcgtgggatcctgtcccttctctgtctccggctactacaggtgcc
ctcatcagccacgagaagctgctgctgcagatcaaccccgagcgggagctggggagcatg
agctacaaactcggccaggtgtccatccactccatgtggctggggaacagcatcacaccc
ctgagggaggaagaatgggacgaggaagaggaggaggaggccgatgcccccgcaccttcg
tcaccacccacgtctccagtcaactccaggaaacaccgggctggagttgacatccactcc
tgttcgcagtttttgcttgagttgtacagccgctggatcctgccgtccagctcagccagg
aggaccccggccatcctgatcagtgaggtggtccgatcccttctagtggtctcagacttg
ttcactgagcgcaaccagtttgagctgatgtatgtgacgctgacagaactgcgaagggtg
cacccttcagaagacgagatcctcgctcagtacctggtgcctgccacctgcaaggcagct
gctgtccttgggatggacaaggccgtggcggagcctgtcagccgcctgctggagagcacg
ctcaggagcagccacctgcccagcagggtcggagcgctgcacggcgtcctctatgtgctg
gagtgcgacctgctggacgacaccgccaagcagctcatcccagtcatcagcgactatctc
ctctccaacctgaaagggatcgcccactgcgtgaacattcacagccagcagcacgtactg
gtcatgtgtgccactgcgttttacctgattgagaactatcctctggacgtagggccggaa
ttttcagcatcagtaatacagatgtgtggggtgatgctgtccggaagtgaggagtccacc
ccctccatcatttatcactgtgccctcagaggcctggagcgcctcctgctctctgagcag
ctctcccgcctggatgcagaatcgctggtcaagctgagtgtggacagagtgaacgtgcac
agcccgcaccgggccatggcggctctgggcctgatgctcacctgcatgtacacaggaaag
gagaaagtcagtccgggtagaacttcagaccctaatcctgcagccccagacagcgagtca
gtgattgttgctatggagcgggtatctgttctttttgataggatcaggaaaggctttcct
tgtgaagccagagtggtggccaggatcctgccccagtttctagatgacttcttcccaccc
caggacatcatgaacaaagtcatcggagagtttctgtccaaccagcagccatacccccag
ttcatggccaccgtggtgtataaggtgtttcagactctgcacagcaccgggcagtcgtcc
atggtccgggactgggtcatgctgtccctctccaacttcacgcagaggaccccggtcgcc
atggccacgtggagcctctcctgcttcttcgtcagcgcgtccaccagcccgtgggttgcg
gcgatcctcccacatgtcatcagcaggatgggcaagctggagcaggtggacgtgaacctt
ttctgcctggtcgccacagacttttacagacaccagatagaggaggagctcgaccgcagg
gccttccagtctgtgtttgaggtggttgcagccccaggaagcccgtatcaccggctgctg
acttgtttacgaaatgtccacaaggtcaccacctgctga
DBGET
integrated database retrieval system
