Pongo abelii (Sumatran orangutan): 100442759
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Entry
100442759 CDS
T01416
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100442759 (CHD1)
03036 Chromosome and associated proteins [BR:
pon03036
]
100442759 (CHD1)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100442759 (CHD1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100442759 (CHD1)
SLIK complex
100442759 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100442759
NCBI-ProteinID:
XP_009239198
Ensembl:
ENSPPYG00000015659
UniProt:
A0A2J8XF00
LinkDB
All DBs
Position
4:complement(106663862..106738183)
Genome browser
AA seq
1709 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAILKKQQQQQQQQQHQASSNS
GSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETES
DYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNV
SYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEAD
GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK
AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL
QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFK
VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI
SFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKK
FGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGP
TFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSN
LLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKK
EALSGVGSSKRRKARAKKNKAMRSVKVKEEIKSDSSPLPSEKSDEDDDKLSESKSDGRER
SKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSE
REQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHA
IKKRQESQQNNDQNSNLNPHVIRNPDVERLKENTNHDDSSRDSYSSDRHLTQYHDHHKDR
HQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLE
GSLKDRSHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQMDHRASSSGPRSPLD
QRSYGSRSPFEHSVEHKSTPEHTWSSRKT
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactccggatctgaatcaggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagtcctagtattctggccgttcagagatctgca
atcctcaagaagcagcaacagcagcagcaacaacaacaacatcaagcctcatctaatagc
ggatcagaagaggattcctctagcagtgaagattccgatgactcatcaagtgaggtcaaa
aggaaaaagcataaagatgaagattggcaaatgtctgggtcaggatctccatctcagtct
ggttcagattcagaatctgaagaagagagagataaaagcagttgtgatgaaacagaatct
gattatgagccaaaaaacaaagtcaaaagcagaaaacctcaaaatagatctaagtcaaaa
aatggaaagaagattcttggacaaaaaaagagacagattgattcatctgaggaggaagat
gatgaagaagattatgataatgataaaagaagttctcgtcgccaagcaactgttaatgtt
agctataaggaggatgaagaaatgaaaacagattctgatgacctactggaagtctgtgga
gaggatgttcctcaacctgaggaagaggaatttgaaaccatagaaagatttatggattgt
cggattgggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagat
ggtgacccaaatgcaggctttgaaaaaaacaaagaaccaggagagattcagtatttaatt
aaatggaaaggatggtcccatatccacaacacttgggagacagaagaaaccctcaagcag
cagaatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaa
cgatggttgaaaaatgcctctccagaagatgtggaatattataattgccagcaagaactt
acagatgatctacataaacagtatcaaatagtggaacgtataattgctcattccaatcaa
aagtcagcagctggttatcctgattattactgcaaatggcagggccttccatactcagag
tgcagctgggaagatggagctctcatttccaaaaagtttcaagcatgcattgatgagtat
tttagcaggaaccaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaagg
ccaaggtttgtagccctgaagaagcagccatcctatattggaggacatgagggcttagaa
ttaagagattatcaactgaatggtttaaattggcttgctcattcttggtgcaaaggaaat
agttgcatactcgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctg
aattatttgtttcatgaacatcaattatatggaccttttttattggtggtaccactctcc
actcttacttcctggcaaagggaaattcagacatgggcttctcaaatgaatgctgtggtt
tatttaggtgacattaacagcagaaacatgataagaactcatgaatggacgcatcatcag
accaaacggttaaaatttaatatactgttaacaacttatgaaattttattaaaggataag
gcattccttggaggtctaaattgggcatttataggtgttgatgaagcacaccgattaaag
aatgatgactcccttctgtataaaactttaatagattttaaatccaatcatcgtctcctt
atcactggaactcctctacagaattccctcaaagagctctggtctttgctacatttcatt
atgccagaaaagttttcttcctgggaggattttgaagaagaacatggcaaagggagagaa
tatggttatgcaagtcttcacaaggagcttgagccatttctgttacgccgagttaagaaa
gatgtggaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgct
ttacagaaacaatattacaaatggattttaactaggaattacaaagccctcagcaaaggt
tccaagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaac
cattgctacctcattaaaccaccagataataatgaattctataataaacaggaggcctta
caacacttaattcgtagtagcggaaaattgattcttcttgacaagctattaattcgccta
agagaacgaggcaatcgagttcttattttttctcaaatggtgcggatgttagatatactt
gcagaatatttgaaatatcgtcaattcccctttcaaagattagatggatcaataaaagga
gaactgaggaaacaagctctagatcattttaatgctgagggatcagaggatttttgcttt
ttgctgtccacaagagctggaggtctagggattaatttagcctctgctgacactgttgtt
atatttgattccgattggaatccacagaatgatcttcaggcacaggctagagcccatcga
attgggcaaaagaaacaggtgaatatttatcgtctagttacaaagggatcagttgaagaa
gatattcttgaaagggccaaaaagaagatggttttagatcatcttgtaattcaaagaatg
gacacaactgggaagacagtactacatacaggttctgccccatcaagttctactcctttc
aataaagaagagttatcagccattttaaagtttggtgctgaggaactttttaaggaacct
gaaggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagagctgaa
actcatgaaaatgaaccaggtcctttaactgtaggagatgaattgctttcccagttcaag
gttgccaacttctcaaatatggatgaggatgacattgagttggaacctgaaagaaattca
aagaattgggaggaaattattccagaagatcaaagaagacgattagaagaagaagaaaga
caaaaagaacttgaagaaatttatatgctcccaagaatgagaaattgtgcaaaacagatt
agtttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagt
gattccatctcagaagggaaaaggccaaagaaacgtggaagaccacggactattcctcgg
gagaatattaaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaa
tttggtggtcctctggaaagattagatgcaattgctcgagatgctgagttagttgataag
tcagaaacagaccttagacgactgggagaattggtacataatggttgcattaaagcttta
aaggatagttcttcaggaacagaacgaacaggtggtagactcggaaaagtgaagggtcca
acattccgaatatcaggagtacaggtgaatgccaagctagtcatctcccatgaagaagaa
ttaatacctttgcacaaatccattccttctgatccagaagaaagaaagcagtatactatc
ccatgccacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaat
ttgttaattggcatctatgaatatggatatggaagctgggaaatgattaaaatggatcct
gacctcagtctaacacacaagattcttccagatgatcccgataaaaaaccacaagcaaaa
cagttgcagacccgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaa
gaagctctttctggtgtgggaagttcaaagaggagaaaagcaagagctaagaagaataaa
gcaatgaggtctgtaaaagtgaaagaggaaataaagagtgattcttctcctctgccttca
gagaagtctgatgaagatgatgataaattgagtgaatccaagtctgatggtagggaaaga
tccaagaaatcttcagtgtcagatgctccagttcatatcacggcaagtggtgaaccagtt
cccatttctgaagaatctgaagagctggatcagaagacattcagcatttgtaaagaaaga
atgaggcctgttaaagcagctttgaaacaacttgataggcctgagaaaggcctttcagaa
agagaacaactagaacatactagacaatgtttaataaaaattggagaccatatcacagaa
tgtctaaaagagtatacaaatcctgaacaaattaagcaatggagaaaaaacctgtggatt
tttgtatctaagtttactgaatttgatgcaagaaaattacataaattatataagcatgct
attaaaaaacggcaggaatctcagcaaaacaatgatcaaaacagcaacttgaatcctcac
gtgattagaaatccagatgtggaaagattaaaagagaatacaaatcacgatgatagcagc
agggacagttattcctctgatagacacttaactcagtaccatgatcatcataaagaccga
catcagggagattcttacaaaaaaagtgattccaggaaaagaccctattcttcttttagt
aatggtaaagaccatcgtgattgggatcactacaagcaagacagcagatattacagcgac
agagagaaacacagaaaactggatgatcacaggagtagagatcacaggtcaaatttggaa
ggaagtttaaaagatagatctcattctgatcatcgttctcactcagatcatcggttacat
tcagaccaccggtcaagttctgaatatacgcaccataaatcttccagggattataggtat
cactcagactggcaaatggaccacagagcttccagcagtggccctaggtcaccactagat
cagagatcttatggctccagatctccatttgaacattcagttgaacacaaaagtacaccg
gagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
