Pongo abelii (Sumatran orangutan): 100442924
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Entry
100442924 CDS
T01416
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100442924 (COL22A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
100442924
NCBI-ProteinID:
XP_054374847
Ensembl:
ENSPPYG00000018902
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All DBs
Position
7:complement(154972722..155310219)
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AA seq
1611 aa
AA seq
DB search
MAGLRGNAVAGLLWMLLLLWSGGGGCQAQRAGCKSVHYDLVFLLDTSSSVGKEDFEKVRQ
WVANLVDTFEVGPDRTRVGVVRYSDRPTTAFELGLFGSQEEVKAAARRLAYHGGNTNTGD
ALRYITARSFSPRTGGRPGDRAYKQVAILLTDGRSQDLVLDAAAAAHRAGIRIFAVGVGE
ALKEELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGDRFKHTNGG
TKEITGFDLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTF
RFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGAVKDAVRVVFRGSRVNDL
FDRDWHKIALSIQAQNVSLYIDCALVQTLPIEERENIDIQGKTVIGKRLYDSVPIDFDLQ
RIVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCP
AGEKGEMGVAGPMGLPGPKGDTGATGLVGAPGPKGEKGDVGIRPFGQGEKGEKGSLGLPG
PPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGHVGAPGLQGERGEKGTQG
EKGERGLDGFPGKPGEAGQQGRPGPPGVAGPQGEKGDVGPAGPPGVPGLVVQREGLKGEQ
GAPGPRGHQGPPGPPGAPGPIGPEGRDGPPGLQGLRGKKGDVGPPGIPGLLGLQGPPGSP
GVPGPPGPGGSPGLPGEIGFPGKPGPPGPAGPPGKDGLNGPLGLPGIKGEPGERGEDGLP
GKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEK
GEAGPAGPPGLPGTFPFQTSLFTPHPRMPGEQGPKGEKGDPGMPGEPGLQGHPGELGPWG
PAGPPGAKGQEGTRGAPGAAGNPGAPGHVGPPGPSGPPGSVGAPGLRGPPGKDGERGEKG
AAGEEGSPGPVGPRGDPGAPGFPGPPGKGTDGEPGLHGSPGLPGPLGTKGDRGAPGIPGS
PGSRGDPGIGVAGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKP
GLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPP
GLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPP
GIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPP
GFKGHTGDSGTPGPRGEPGAMGPPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSP
GEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGER
GDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGPPGENGPAGPPGPPGQPGFPGLR
GESPSMETLRRLIQEELGKQLETKLAYLLAQMPPAHMKSSQGRPGPPGPPGKDGLPGRAG
PMGEPGRPGQRGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKD
GLPGIPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPGNVKGP
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctccgagggaatgctgtggctggcctcctctggatgctgctgctgctgtgg
agtgggggcggcggctgccaggctcagcgggcaggttgcaaaagtgtccactatgatctg
gtcttcctcctggacacctcctccagcgtgggcaaggaggactttgagaaggtccggcag
tgggtggccaacctggtggacaccttcgaggtgggccccgaccgcacccgtgtgggggtt
gtgcgatacagcgaccggcccaccacggccttcgagttgggactctttggctcgcaggag
gaggtcaaggcggctgcccggcgcctcgcctaccatgggggcaacaccaacacgggtgac
gcgctgcgctacatcacggcccgcagcttctccccacgcaccggcggccgtcccggggac
cgcgcctacaagcaggtggccatcctgctcaccgacggccgcagccaggacctggtgctg
gacgccgcggcggccgcccaccgcgctggcatccgcatctttgccgtgggcgtgggcgag
gcactcaaggaggagctggaggagatcgcctcagagcccaagtccgcccacgtcttccac
gtgtctgacttcaatgccatcgacaagatccggggcaagctgcggcgccgtctttgtgaa
aatgtgctctgtcctagtgttcgtgtagaaggagatcgctttaagcacaccaatggagga
accaaggaaatcacaggttttgacctgatggatttgttcagtgtgaaggaaatcttgggg
aagagagagaatggagctcagagttcctatgtacggatgggatccttccctgtggtgcaa
agtactgaggatgtgttcccccaaggtttacctgatgagtacgcctttgtcacaaccttc
cggttcaggaaaacctctcggaaggaagactggtatatctggcaggtcatcgaccagtac
ggcatcccacaggtctctatccggctggatggtgaaaacaaggcagtcgagtacaacgct
gtgggtgccgtgaaagatgctgtcagggtggtcttccgaggttcccgggtcaatgacctc
tttgaccgggactggcacaagatcgccctgagcatccaggcccagaacgtctccctgtac
attgactgtgcgctggtgcagacactacccatcgaggaacgggagaacattgacatccag
ggcaagactgtgattggcaagcgcctctatgacagtgtgcccattgactttgacctacag
cggattgtgatctattgtgactcaagacatgcagaactggagacttgttgtgatatcccc
tcgggtccgtgccaggtgaccgtggtgacagagcctccacctccacccccaccccagcgg
cctcccaccccaggcagtgaacagattgggtttttgaagaccatcaactgctcctgccca
gccggagagaagggtgaaatgggagttgctggccccatggggctccctggtccaaaggga
gacacaggagccactgggctggttggcgctcctggacctaagggagagaaaggtgatgtg
ggcataagaccttttggccaaggggaaaagggtgaaaagggttccctgggcctgcccggc
ccccctgggagagatggcagcaaaggcatgagaggggaaccaggagagctgggagagccg
gggctgccgggtgaggtcggcatgcgggggccccaaggaccacctggactccctggacct
cctggacatgtcggagctcctggtctccaaggagaacgaggtgaaaagggaactcaagga
gaaaagggagagcgaggcctggatggattccccgggaagcctggggaagcaggacagcag
ggcaggcctggccctcctggtgtggcaggaccccagggagaaaagggtgacgtgggacct
gcggggcctcctggtgtaccgggcttggtggtgcagcgagagggcttgaaaggggaacag
ggagctccaggacccagaggtcaccaaggtccccccggtcctccaggagctccgggtcca
ataggcccagaaggcagggatggacctcctggtttgcaaggtctccgagggaagaaaggt
gacgtgggaccacctggaatccctggattgctggggctgcagggccctccaggatcccct
ggtgtcccaggcccccctggaccaggaggttctccgggtttgcctggagagattggcttc
ccgggaaagcctggacctcctgggcccgcgggaccccctggaaaggacgggctgaatgga
ccattaggcctgccaggaatcaagggagaaccaggagaaagaggggaagatggtctgcct
ggaaaaccaggccttcggggagaaattggggagcagggcctggcaggccgacctggagag
aagggtgaagcaggcctcccaggggctccaggcttcccaggtgtgagaggagagaaagga
gaccagggagaaaaaggtgaactgggacttccaggactgaaaggtgaccgaggtgaaaag
ggtgaagctggtcctgcaggccctcctgggttacctggaacttttccttttcagacatcc
ctgttcacaccacatccacggatgcccggagaacaagggcccaaaggagagaagggcgat
ccaggcatgcctggggaaccgggactgcagggccatcctggagaattggggccttgggga
cctgctggaccaccgggtgccaagggacaagaaggcacacgtggggctcctggagcagct
ggaaaccctggtgctcctggacatgtcggtccccccggtcccagtggccctccaggaagt
gtgggtgctcctggcctcagaggcccccctgggaaagatggggagcgtggtgagaagggc
gcagcgggggaagaaggcagcccagggccagttggtcccaggggagatcctggtgctcct
gggttccctgggccacccggaaaagggacagatggagagccgggactccatggatcacct
ggactccctggacccttaggaaccaagggggatcgaggagctcctgggatccctggttct
cctggcagccgcggtgacccaggcattggggttgctggccctcctggcccttccggacca
ccaggagacaaaggccccccgggatcacgaggcttacctggattccccggcccccagggc
ccagctggccgggacggtgcaccaggaaatccaggagaaagagggcctcctggcaagccg
ggcctctcttcactactgtctccaggggacataaatctcttggctaaggatgtgtgcaat
gactgccctcctggccccccaggcctccctggtctaccaggctttaaaggggacaaaggt
gtcccaggaaagccagggagagaaggcacagaagggaaaaagggagaggctgggcctcca
ggcctaccagggcccccaggaatagctggaccacagggaagtcaaggagaacgtggtgca
gatggtgaggttggacagaaaggtgatcagggtcatcctggagttccaggtttcatgggg
cccccagggaaccctgggccaccaggggcagatggaattgcgggagctgctggaccacca
ggaatccaagggtcacctgggaaagaaggccctcctggcccccaaggcccatctggatta
cccggaatcccaggagaagaaggcaaagagggcagagatggaaagccaggtccccctgga
gagccgggcaaagcaggagagccaggtctaccaggaccagagggtgccagaggcccacct
ggcttcaagggacacacaggcgattctggcacacccggtccccggggagagcctggtgcc
atggggcctcctggtcaggaagggttaccaggaaaagatggtgacactggacccactggg
ccacagggtccccaaggaccaaggggcccaccgggcaagaatggatcaccgggatctcca
ggagagcctggcccttcgggaacccctggccagaaaggaagcaaaggggaaaatggcagc
ccaggacttcctggcttcctgggtccccgtgggcctccgggagaaccaggagagaaagga
gtcccaggcaaggagggagtccctgggaagcctggagagcctggattcaaaggagaaagg
ggagatcctgggatcaaaggtgacaaaggacctcctggtggaaagggccagcccggggac
cctggaatcccaggccacaaaggccacacaggcctgatgggtccccaaggaccacctggg
gagaacggaccagctggacccccagggcctccaggccagccgggatttccaggactgagg
ggggagtctccatccatggaaaccctgcgtcggcttattcaagaagagctggggaagcag
cttgaaaccaaactcgcctacctcttggcccagatgcccccagcgcacatgaagtcatct
caaggcagacctgggcccccagggccccctggaaaagatgggcttccaggccgggctggc
cccatgggggagccaggtcgtcctgggcagaggggtctggaaggaccctctggacccata
ggtcccaaaggtgagcgaggagccaaaggtgacccaggtgcacctggagttggcctccga
ggcgagatgggacctcctggaatcccaggtcaacccggggaacctggctatgctaaagat
ggacttcctgggatccctggccctcaaggggagacaggaccagctggacatcctggcccc
ccaggacctcccggtcccccaggccagtgtgacccttcccagtgtgcctacttcgccagc
cttgctgcccggccgggtaacgtgaagggtccctag
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