Pongo abelii (Sumatran orangutan): 100442965
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Entry
100442965 CDS
T01416
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X8
KO
K14409
protein SMG7
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100442965 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100442965 (SMG7)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100442965 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
100442965 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
100442965
NCBI-ProteinID:
XP_024105384
Ensembl:
ENSPPYG00000000427
LinkDB
All DBs
Position
1:complement(66285335..66368178)
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AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTSATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSV
IESLAADGSPGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARK
TPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQP
TAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYW
DSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccgaaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcacgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaatccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtatttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctccaatggtcagccttataatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctccactaatctgcaaaaagcactttct
aaagcactggaaagccgagatgaggtgaaaaccaagtggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaaccgagcagcacagttacagccaagatgagcagctatgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctacagaatgagtct
caggaggagtcctacaatgcctatcctcttccagcagtcaaggtctccatggactggcta
agactcagacccagggtctttcaggaggcagtggtggatgaaagacagtacatttggccc
tggttgatttctcttctgaatagtttccatccccatgaagaggacctctcaagtactagt
gcaacaccacttccagaggagtttgaattacaaggatttttggcattgagaccttctttc
aggaacttggatttttccaaaggtcaccagggtattacaggagacaaagaaggccagcaa
cgacgaatacgacagcagcgcttgatctctataggcaaatggattgctgataatcagcca
aggctgattcaatgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagaa
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagaaacatctgtg
atagagtcgctggctgcagatgggagcccagggctaaaatcagtgctatctacaagccga
aatttgagcaacaactgtgacacaggagagaagccagtggttaccttcaaagaaaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaataactgtaactaagaatgatggaaagaaggacaacaacaagagg
aaaactgaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatcccagacagaactaagaaagactccagtgtctgaagccagaaaa
acacctgtaactcaaaccccaactcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagcaggccagggtttccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaatcacagccaccttcccagcaaccccttacatctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaagctctaactcagcaacaacaatcccct
acaaaagctgtgccggctttggggaaaagcccgcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaattatgcctgtgaaacagccctactaccttcagacccaagaccccataaaactgttt
gagccgtcattgcaacctcctgtaatgcagcagcagcctctagaaaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgg
gattcttcctacagcatggctgataacagatctgtgatggcacagcaagcaaatatagac
cgcaggggcaaacggtcaccaggagtcttccgtccagagcaggatcctgtacccaggatg
ccgtttgaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccggctctg
ctggggcctctcgcctctcttcctggacgaagcctttttaaatccttattggagaagcct
tcagagctcatgtcacattcatcctctttcctgtccctcaccggattctctctcaatcag
gaaagatacccaaataatagtatgttcaatgaggtatatgggaaaaacctgacatccagc
tccaaagcagaactcagtccctcaatggccccccaggaaacatctctgtattcccttttt
gaagggactccgtggtctccatcacttcctgccagttcagatcattcaacaccagccagc
cagtctcctcattcctctaacccaagcagcctgcccagctctcctccaacacacaaccat
aattctgttccattctccaattttggacccattgggactccagataacagggataggagg
actgcagatcggtggaaaactgataagccagccatgggtgggtttggcattgattatctc
tcagcaacgtcatcctctgagagcagttggcatcaggccagcactccgagtggcacctgg
acaggccatggcccctccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcag
cagaagcagaaacagcaacggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
