Pongo abelii (Sumatran orangutan): 100443089
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Entry
100443089 CDS
T01416
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100443089 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100443089 (WDR33)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100443089 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Collagen
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
100443089
NCBI-ProteinID:
XP_002812412
Ensembl:
ENSPPYG00000012760
UniProt:
H2P796
LinkDB
All DBs
Position
11:20086624..20190715
Genome browser
AA seq
1336 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPP
PQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGTQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASE
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccagcaccag
gcacctcgacagctgttttataagcgacctgattttgcacaacagcaagcaatgcaacag
cttacttttgatggaaaacgaatgagaaaagctgtgaaccgaaaaaccatagactacaat
ccatctgtaattaagtatttggagaacagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattacaatgatctggtcccacctataggaatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcggacatcaacaaataaagtaaagtgt
cctgtatttgttgttaggtggactccagaaggaagacgcttggtcactggagcttctagt
ggggagtttaccttgtggaatggactcactttcaattttgaaacaatattacaggctcac
gacagcccagtgagggccatgacgtggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaaccaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaacctcaatggc
aattggctactcacagcatcacgtgatcatctctgtaaactttttgatatcagaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggttctttgttattctggcat
gttggggtggagaaggaagtgggtgggatggagatggcccacgaagggatgatctggagt
ctggcctggcatcctcttgggcatattctctgctcaggctcaaatgaccatactagcaaa
ttctggactcgaaaccgaccaggtgataaaatgcgagatcgatataatctaaacctttta
cctggaatgtctgaagatggagtagaatatgatgacctcgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggaa
gtgatgcaaaaggatcagaaaaaagtacctcagaagaaagttccttatgcaaaacccatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgctccaaatgag
gtgctgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
attgagcaagaaatggctacattacagtatactaacccacaacttctggagcaacttaaa
attgaaagacttgcacagaaacaagttgagcaaattcagcctcctccctcatctggcacc
cctctcctcggaccccagccttttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttaggcctcctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacagggaccccagggt
ccgccccaggggttgccacggcctcaggacatgcatgggccccaaggaatgcagaggcat
cctggacctcatggccctttgggacctcaagggccacctggaccgcaaggtagttctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacagggtcacataggcccccaa
ggcccgcctggccctcagggtcacttgggcccacaggggcctccgggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaagggcctcctcatcctcatgggatccaaggc
ggaccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcaggggcctccaggcccccgggagaaccagggtcctgctccccaaggg
atgatgatgggccacccgcctcaagagatgagaggacctcaccctccaggtggactactg
ggacacggccctcaggaaatgagaggtcctcaggagatccgaggcatgcaggggcctcca
ccccaaggatcaatgctgggacctccccaggaattgcgagggcctccaggctcacaaagt
cagcaggggccgccccagggctctttaggacctccaccccagggtggcatgcaaggacct
cccggacctcagggacagcagaacccagcaagagggccacatccatctcaagggccaata
ccattccagcaacagaaaacgcctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagagcacaggccccccacccctgataccaggcctagggcagcagggaacacaa
ggtcgcattccccctctgaaccccggacaaggacctggccccaacaaaggtgactcccgc
ggccctccaaaccaccacatgggcccgatgtcagagaggcggcatgagcagagcggcggg
cctgagcatgggcccgagagggggcctttccggggtggccaggactgcaggggtccccct
gataggcgtggccctcacccagacttccccgatgacttcagcagaccagatgacttccac
cctgacaagcgctttggccaccggttacgtgaatttgaggggcgaggaggacctttaccg
caagaagagaagtggaggcgagggggccctgggcctccgtttccccctgatcacagggaa
ttcagcgagggggatggccggggtgcagcccgaggccctccaggggcatgggaaggccgc
aggcccggagatgaacgtttcccccgggatcccgaggacccacgttttcgagggcgcaga
gaagaaagtttcagaagaggagccccgccgaggcatgagggccgtgctccccccagagga
agggatggttttcctggtcctgaagactttggtccagaggagaattttgatgcttctgag
gaagcggcccgaggacgagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttacttcccactcctgacgagttccctcgctttgaaggagggcggaagccagat
tcctgggatggaaacagagagcctgggccaggtcatgaacattttcgtgatgctccccgc
cctgatcatccccctcacgatggtcattccccagctagcagagaacgctcctcttctctc
caaggcatggacatggcatccctacctccccgaaagcgcccctggcatgatggcccaggc
acttctgagcacagagagatggaggccccaggaggcccttctgaagaccgaggaggcaaa
ggccgagggggcccaggacctgcccagagagtgcccaaatctgggcgttccagctcctta
gacggagagcaccacgatggataccacagagatgaaccttttgggggccctccaggcagc
ggcaccccttctcgagggggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccgccgaggcgaggagcttcacggggtggtggaaggggtcggtag
DBGET
integrated database retrieval system
