Pongo abelii (Sumatran orangutan): 100443207
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Entry
100443207 CDS
T01416
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X3
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04612
Antigen processing and presentation
pon05145
Toxoplasmosis
pon05152
Tuberculosis
pon05164
Influenza A
pon05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100443207 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100443207 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
100443207 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100443207 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
100443207 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pon01001
]
100443207 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pon04054
]
100443207 (CIITA)
Enzymes [BR:
pon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100443207 (CIITA)
Protein kinases [BR:
pon01001
]
Serine/threonine kinases: Other
TAF1 family
100443207 (CIITA)
Pattern recognition receptors [BR:
pon04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100443207 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
100443207
NCBI-ProteinID:
XP_009248735
Ensembl:
ENSPPYG00000007096
LinkDB
All DBs
Position
18:12194465..12243053
Genome browser
AA seq
1130 aa
AA seq
DB search
MRCLAPRPAGSYLSEPQGSSQCAIMEVGPLEGGYLELLNSDADPLCLYHFYDQMDLAGEE
EIELYSEPDTDTINCDQFSRLLCDIEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFK
HIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPPTVVTGSLLVGPVSNSS
TLPCLPLSALFNQEPASGQTHLEKTDQIPIPSSSSSLSCLNLPEGPIQFVPTISTLPHGL
WQISGAGTEVSSIFIYHGEVPQASQVPPPSGLTVHGLPTSPDRPGSTSPFAPSATDLPSM
PEPALTSRANMTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYRSLQDTYGAQPAGRDGIL
VEVDLVRARLERSSSKSLERELATPDWAERQLAQGGLAEVLLADKEHRRPRETRVIAVLG
KAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAA
DEVFSHILKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRG
CTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYFESSGMTEHQDRALTLLRD
RPLLLSHSHSPTLCRAVCQLSEALLELGEDAKLPSTLTGLYVGLLGRAALNSPPGALAEL
AKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHPPGASESELAFPSFLLQCFLGAL
WLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSATA
LADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQHVVQELPARLSFLGTRL
TPPDAHVLGKALEAAGRDFSLDLRSTGICPSGLGSLVGLSCVTRFRAALSDTVVLWESLR
QHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKL
EFALGPISGPQTFPKLVQILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETL
NLSQNNITDLGAYKLAEALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQ
YNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctccacgccctgctgggtcctacctgtcagagccccaaggcagctca
cagtgtgccatcatggaggtggggccgctagaaggcggctacctggagctccttaacagc
gatgctgaccccttgtgcctctaccacttctacgaccagatggacctggctggagaagaa
gagattgagctctactcagaacccgacacagacaccatcaactgtgaccagttcagcagg
ctgttgtgtgacatagaaggcgatgaagagaccagggaggcttatgccaatatcgcggaa
ctggaccagtatgtgttccaggactcccagctggagggcctgagcaaagacattttcaag
cacataggaccggatgaagtgattggtgagagtatggagatgccagcagaagttgggcag
aaaagtcagaaaagacccttcccagaggagcttccggcagacctgaagcactggaagcca
gctgagccccccactgtggtgactggcagtctcctagtgggaccagtgagcaactcctcc
accctgccctgcctgccattgtctgcgctgttcaaccaggagccagcctccggccagacg
cacctggagaaaaccgaccagattcccataccttcctccagttcctcgttgagctgcctg
aatctccctgagggacccatccagtttgtccccaccatctccactctgccccatgggctc
tggcaaatctctggggctggaacagaggtctccagtatattcatctaccatggtgaggtg
ccccaggccagccaagtaccccctcccagtggactcactgtccacggcctcccaacatct
ccagaccggccaggctccaccagcccctttgctccatcagccactgacctgcccagcatg
cctgaacctgccctgacctcccgagcaaacatgacagagcacaagacgtcccccacccaa
tgccaggcagctggagaggtctccaacaagcttccaaaatggcctgagccagtggagcag
ttctaccgctcactgcaggacacgtatggggcccagcccgcaggccgcgatggcatcctg
gtggaggtggatctggtgcgggccaggctggagaggagcagcagcaagagcctggagcgg
gaactggccaccccggactgggcagaacggcagctggcccaaggaggactggctgaggtg
ctgttggctgacaaggagcaccggcggccgcgtgagacacgagtgattgctgtgctgggc
aaagctggtcagggcaagagctattgggctggggcagtgagccgggcctgggcttgtggc
cggcttccccagtacgactttgtcttctctgtcccctgccactgcttgaaccgtccgggg
gatgcctatggcctgcaggatctgctcttctccctgggcccacagccactcgtggcggcc
gatgaggttttcagccacatcttgaagagacctgaccgcgttctgctcatcctagacgcc
ttcgaggagctggaagcgcaagatggcttcctgcacagcacgtgcggaccggcaccggcg
gagccctgctccctccgggggctgctggccggccttttccagaagaagctgctccgaggt
tgcaccctcctcctcacagcccggccccggggccgcctggtccagagcctgagcaaggcc
gacgccctatttgagctgtccggcttctccatggagcaggcccaggcctacgtgatgcgc
tactttgagagctcagggatgaccgagcaccaagacagagccctgacgctcctccgggac
cggccacttcttctcagtcacagccacagccctactttgtgccgggcagtgtgccagctc
tcagaggccctgctggagcttggggaggacgccaagctgccctccacgctcacgggactc
tatgtcggcctgctgggccgtgcagccctcaacagcccccccggggccctggcagagctg
gccaagctggcctgggagctgggccgcagacaccaaagtaccctacaagaggaccagttc
ccatccgcagacgtgaggacctgggcgatggccaaaggcttagtccaacacccaccaggg
gcctcagagtccgagctggccttccccagcttcctcctgcaatgcttcctgggggccctg
tggctggctctgagtggcgaaatcaaggacaaggagctccctcagtatctagcattgacc
ccaaggaagaagaggccctatgacaactggctggagggcgtgccacgctttctagccggg
ctgatcttccagcctcgcgcccgctgcctgggagccctagtcgggccatcggcgactgcc
ttggcggacaggaagcagaaggtgcttgcgaggtacctgaagcggctgcagccggggaca
ctgcgggcgcggcagctgctggagctgctgcactgcgcccacgaggccgaggaggctgga
atttggcagcacgtggtgcaggagctccccgcccgcctctcttttctgggcacccgtctc
acgcctcctgatgcacatgtactgggcaaggccttggaggcggcgggccgagacttctcc
ctggacctccgcagcactggcatttgcccctctggattggggagcctcgtgggactcagc
tgtgtcacccgtttcagggctgccttgagtgacacagtggtgctgtgggagtccctgcgg
cagcatggggagaccaagctacttcaggcagcagaggagaagttcaccattgagcctttc
aaagccaagtccctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacg
agaagttcctcggaagacacagctggggagctccctgctgttcgggacctaaagaaactg
gagtttgcgctgggccccatctcaggcccccagactttccccaaactggtgcagatcctc
acggccttttcctccctgcagcatctggacctggatgcgctgagtgagaacaagatcggg
gacgagggtgtctcgcagctctcagccaccttcccccagctgaagtccttggaaaccctc
aacctgtcccagaacaacatcactgacctgggtgcctacaaactcgccgaggccctgcct
tcactcgctgcatccctgctcaggctaagcttgtacaataactgcatctgcgacgtggga
gccgagagcctggctcgtgtgcttccggacatggtgtccctccgggtgatggatgtccag
tacaacaagttcacggctgccggggcccagcagctcgctgccagccttcggaggtgtcct
catgtggagacgctggcgatgtggacgcccaccatcccattcagtgtccaggaacacctg
caacaacaggattcacggatcagcctgagatga
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