Pongo abelii (Sumatran orangutan): 100443234
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Entry
100443234 CDS
T01416
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2 isoform X2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100443234 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100443234 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pon03310
]
100443234 (NR1D2)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100443234 (NR1D2)
Nuclear receptors [BR:
pon03310
]
1. Thyroid hormone like
1D. Rev-Erb
100443234 (NR1D2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
100443234
NCBI-ProteinID:
XP_009237549
Ensembl:
ENSPPYG00000014064
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Position
3:complement(118143261..118178593)
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AA seq
504 aa
AA seq
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MKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNI
QYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAM
KTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLQPKPQLEQENIKSSSPPSSDFAKEEVIG
MVTRAHKDTFMYNQEQRENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQ
QHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYMCN
TGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQV
NLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNA
LQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLL
LKLPDLRSLNNMHSEELLAFKVHP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagcaaatcgagtgcacctgggatgacaaaaagtcatagtggtgtgacaaaa
tttagtggcatggttctactgtgtaaagtctgtggggatgtggcgtcaggattccactat
ggagttcatgcttgcgaaggctgtaagggtttctttcggagaagtattcaacaaaacatc
cagtacaagaagtgcctgaagaatgaaaactgttctataatgagaatgaataggaacaga
tgtcagcaatgtcgcttcaaaaagtgtctatctgttggaatgtcaagagatgctgttcgg
tttggtcgtattcctaagcgtgaaaaacagaggatgctaattgaaatgcaaagtgcgatg
aagaccatgatgaacagccagttcagtggtcacttgcaaaatgacacattagtagaacat
catgaacagacagccttgccagcccaggaacagctgcaacccaagccccaactggagcaa
gaaaacatcaaaagctcttctcctccctcttctgattttgcaaaggaagaagtgattggc
atggtgaccagagctcacaaggatacctttatgtataatcaagagcagcgagaaaactca
gctgagagcatgcagccccagagaggagaacggattcccaagaacatggagcaatataat
ttaaatcatgatcattgcggcaatgggcttagcagccattttccctgtagtgagagccag
cagcatctcaatggacagttcaaagggaggaacataatgcattacccaaatgggcatgcc
atttgtattgcaaatggacattgtatgaacttctccaatgcttatactcaaagagtatgt
gatagagttccgatagatggattttctcagaatgagaacaagaatagttacatgtgcaac
actggaggaagaatgcatctggtttgtccaatgagtaagtctccatatgtggatccacat
aaatcaggacatgaaatctgggaagaattttcgatgagcttcactccagcagtgaaagaa
gtggtggaatttgcaaagcgtattcctgggttcagagatctctctcagcatgaccaggtc
aaccttttaaaggctgggacttttgaggttttaatggtacggtttgcatcattatttgat
gcaaaggaacgtactgtcacctttttaagtggaaagaaatatagtgtggatgatttacat
tcaatgggagcaggggatctgctaaactctatgtttgaatttagtgagaagctaaatgcc
ctccaacttagtgatgaagagatgagtttgtttacagctgttgtcctggtatctgcagat
cgatctggaatagaaaacgtcaactctgtggaggctttgcaggaaactctcattcgtgca
ctaaggaccttaataatgaaaaaccatccaaatgaggcctctatttttacaaaactgctt
ctaaagttgccagatcttcgatctttaaacaacatgcactctgaggagctcttggccttt
aaagttcacccttaa
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