Pongo abelii (Sumatran orangutan): 100443449
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Entry
100443449 CDS
T01416
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X6
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100443449 (CHD9)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100443449 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
100443449
NCBI-ProteinID:
XP_009249000
Ensembl:
ENSPPYG00000007348
LinkDB
All DBs
Position
18:52311263..52586425
Genome browser
AA seq
2881 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDFEQLNQFDSIKFHHVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVSD
GSPMWGHQTATTISNQNGSPFHQQGHSHSMHQNKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMNVSGPHRVNVNHPPQMTNASNSQQSISMQQFSQTSNPSAH
FHKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHISPNSLLQSSAVLASNHTNQ
TLSDFTGSNSFSPHRGIKQESTQHILNPNTSLNSNNFQILHSSHPQGNYSNSKLSPVHMN
FPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPHFDE
STFGQDNSSHILDHDLDRQFTSHLVTRPSDMAQTQLQSQARSWHSSFSNHQHLHDRNHLC
LQRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKER
GERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKDSKKTKTCSKLKEKTKIGKLIIT
LGKKQKRKNESSDEISDAEQMPQHTLKDQDSQKRRSNRQIKRKKYAEDVEGKQSEEEVKG
SMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRTVKKEISPGVMIDTEEFFVKY
KNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLE
VSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRRLDRP
PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLY
EILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQG
RIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH
KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMEL
RKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHK
VLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRA
GGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRA
SLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDID
QILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGR
NSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRVEK
NLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITPT
EDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKHI
KHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDAD
KSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPA
PAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQ
IQQIQPTFSVPTSVMQPIYEEASLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPD
RGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEER
ASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVS
RTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGI
ILEEMKVKSENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVLPQATGDQKSGGKSET
DRRMVAARTEPLTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHS
RSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHMKAYDEES
VASLSTTQDETQDSFQMNNGTPEPAYILQGGYMLAASYWPKDRVMINRLDSICQTVLKGK
WPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKEGGL
KLTFQKQGLAQKRPFDGEDGALGQQQYLTRLRELQSASETSLVNFPKSIPVSGTSIQPTL
GANGVILDNQPIVKKRRGRRKNVEGVDIFFFNRNKPPNHVSLGLTSSQISTGINPALSYT
QPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLHEG
RPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYGV
APEWGDVVKQSGFLPESMYERILTGPIVREEVSRRGRRPKSGIAKATAAAAAASATSVSG
NPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPTGLPSGGEAKNMAAMFPMLL
SGMAGLPNLLGMGGLLTKPTESGTEDKKGSDSKESEGKKERTESQSSENGGENSLSSSPS
TSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSSTFDVQNKNSDLG
SSKSVEVKEEDSRIKDQEDKGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNE
D
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atgacggatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaat
ttgggtgcagaatttgaaccgttgcacatagattcactgaaccatgttcagggtactcca
acacatcagaagatgactgattttgaacagttaaatcaatttgattcaataaaatttcac
catgttaatcaatcttttggtagcccagctgaacatgtgttatctccacactctcagttt
aattgttctccaatccatccccaaaaccaacccaatggtttgtttccagatgtatcagat
ggcagtccaatgtggggccatcagacagctactaccatttcaaatcaaaatggatctcct
tttcaccaacaaggacattcacactctatgcatcaaaataaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcactacgctcacaa
caaaacagaaataatctcaacccagggcagaattctcttagccagtctaaaaattttatg
aatgtttctggtccacatagagtcaacgttaaccacccaccacagatgactaatgcgtct
aattcacaacagtctatttcaatgcagcaattttctcaaacgtcgaatccttcagcacac
ttccacaagtgtagcaatcatcaagaaggaaattttaatggaccttccccaaatatgact
tcttgttctgtcagtaattcacagcaattttcttcacattattccttttccagtaatcat
atatcaccaaacagtctacttcagtcctctgcagttcttgcatctaatcatacaaatcag
actttatctgattttactggaagtaattccttttcacctcatagaggaatcaagcaagaa
tctactcagcatatcctaaaccccaatacatcattgaattcaaataatttccaaatattg
cattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtgcacatgaac
ttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcatgtagaaact
aatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaactgagcca
ttcacaggacttgaccccgaggacctccttcaggagggtcttcttcctcactttgatgag
tcaacattcggacaagataattcaagtcacattttagatcatgaccttgatcggcagttt
acttcgcatcttgtaacacggccttccgatatggctcagactcagttgcaaagtcaggct
cggagttggcattcatcattttctaatcatcagcatttacatgacagaaatcacctatgt
ttacagcgacagcctccatcttccaagaagagcgatggttctgggacatatactaagttg
cagaatacccaggtgagggtcatgtctgagaagaagcagagaaaaaaggtggaatcagaa
agcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaaggagcgt
ggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcagttgaa
ggaaaagaggaaaagaaaggtagaaggatgaaatccaagccaaaggacaaagacagcaaa
aaaacaaaaacgtgttctaagttaaaagagaagacaaaaattggcaaactcattattaca
ttgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgcagaacag
atgccacagcatacattaaaagatcaagactctcaaaaaagaagatcaaatcgacaaatt
aaaagaaaaaaatacgcagaagatgtagaagggaagcaatctgaagaagaggttaaaggt
tctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacagttgttt
gtggagaatccgagtgaagaagatgctgcaattgtagacaaaattctatcttctagaacc
gtaaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgtaaaatac
aagaattactcctatcttcactgtgagtgggccacagaagagcagcttttgaaagataaa
aggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacattttttt
gcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagtattagaa
gtctctttttgtgaagataaggatactggtgagcctgttatttactacttagtaaaatgg
tgctcattgccatatgaagatagtacttgggaactaaaagaagatgtagatcttgcaaaa
atagaagagtttgaacaactgcaagcttcaaggcctgacacaagacgtttggaccgtcct
ccttctaatatttggaagaaaatagatcaatccagggactataaaaatggcaatcaactc
agggaatatcaactggaaggactcaactggctcttgttcaattggtacaatagacgaaac
tgcatcttagcagatgaaatgggtcttggcaaaactattcaatcaattacattcctctat
gaaatccttctgactggtataagaggacctttcctgattattgctccactttctactatt
gcaaactgggagagagaatttcgtacatggactgatattaacgttgtggtttatcatggg
agcctgattagcagacagatgatacagcaatacgagatgtacttcagggattcacagggg
cgtatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatgattctt
ggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaagcacat
aggttaaaaaataaaaattgtaaactcttagagggcctgaaactcatgaatctggaacac
aaggtgcttttgactggcacacctctccaaaatacagttgaagaactatttagtcttctt
cactttcttgaacccttaaggtttccttctgaatcgacatttatgcaagaatttggggat
ctgaaaacagaggaacaggtacagaaacttcaggctatcctgaaaccaatgatgttgaga
cgattaaaagaagatgtggaaaagaagttggcacctaaagaagaaaccatcattgaagta
gaacttactaatattcaaaagaaatactaccgggctatcttggaaaagaacttttctttt
ttatccaaaggagcaggacaaactaatgtacctaacttggtcaataccatgatggagctc
aggaaatgttgtaatcatccatatcttatcaaaggtgctgaggagaaaatacttggagaa
tttagagatacttataatccagctgcttctgattttcatcttcaagcaatgatccagtct
gctggtaaattggtccttattgataaattgcttcccaaaatgaaagctggaggtcataaa
gtgctcatcttctctcaaatggttcgctgccttgacatcctggaggactatctcatacat
aaaagatatttatatgagcgaattgatggcagagtcagaggaaatcttcggcaagctgct
atagatagatttagtaaacctgattcagatagatttgtttttctcctgtgtacccgagct
ggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattctgattgg
aatcctcaaaatgatcttcaggcccaagctcgttgccacagaattggtcagaacaaagca
gttaaagtctacagactggtaactcgtaactcatatgagagagagatgtttgaccgagcc
agtttgaaactgggcctagataaagctgtgttacagagcatgagtggaagagaaagtaat
gttggtggtattcagcagctttccaaaaaggaaatagaagatctgcttcgaagaggtgct
tatggcgctattatggaggaagaagatgaaggctctaaattctgcgaagaggatattgat
cagattttactacgtcgtacaaaaactattacaattgaatcagaaggacgtgggtcaaca
tttgccaaggcaagttttgtggcatctggaaaccggacagatatttctttagatgatccc
aacttctggcaaaaatgggctaaaaaggcagaaatagatatagaggccatcagtggcaga
aacagcttggttattgacactccaagaattaggaagcaaacaagaccttttagtgccaca
aaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagcccaaactc
cggagaccctgtgaccgttccaatggctatggaagaactgaatgctttagagttgagaaa
aacctcctagtttatgggtggggccgatggagagagattctatctcatggccgtttcaaa
aggcagctaaatgaacatgatgtagagataatttgccgagctctcttagcatattgcctt
gttcactaccgaggagatgagaagattaaaggtttcatatgggatctcattactccaact
gaagatggacagacacgagagctacagaatcatctaggcctatcagctcctgtacccagg
ggtcgaaaagggaagaaagtaaaaactcaaacaagctcatttgatatacaaaaagcagaa
tggcttcgaaaatataatcccgagcagctacttcaagatgaaggctacaaaaaacatata
aaacaccactgtaataaggttttgcttcgtgtgagaatgctgtattatctaaagcaagaa
gtcattggaaatgagtgtcagaaagtatttgatggagttgatgcaagtgacattgatgtt
tgggtaccagaaccagaccactcagaagttcctgctgagtggtgggattttgatgccgat
aagtcactccttattggagtttttaaacatggatatgaaaaatataacactattcgagca
gacccagcattatgcttcttggaaagagtgggaaaacctgatgacaaagcagttgctgcc
gaacagagagcgaatgattatatggatggggatgtggaagatccagaatacaaacctgcc
ccagccatctttaaagatgatatagaggatgatgtgtcctcaccaggagatcttgttata
gcagatggagatggtcaactgatggagggtgataaagtatattggcctactcaatcagct
ttaaccacacgtttaaggcgtctcatcactgcataccagcgtactaataaaaacagacaa
attcaacagatacaaccgactttctcggtgcctaccagtgtaatgcagcctatttatgag
gaagccagtcttaatcctaaaatggcagccaagatagaaagacagcaaagatggacaaga
agagaagaagctgacttttatagagttgtatctacatttggagtcgtttttgaccctgac
agaggccaatttgattggacaaaatttagagctatggctaggctacataagaaaactgat
gatagtttggaaaaatatttgtacgcattcatgtccatgtgtcggagggtttgtcgtctt
ccttccaaagaagaattggtggatccaaatatttttatccagcccatcacagaagaacgt
gcttctaggactttgtatcgcattgaacttctaaggaaagtacgggaacaggcccttcga
catccacagttgtttgaacgcttgaagctttgccatccaaatccagatttaccagtctgg
tgggaatgtggccctcatgatagggatttgcttattggtgctgccaaacacggggtgagc
cgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcagaggaac
tacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaatatcaa
gtagcactttctgcttctcctcttacctctctacctaggctcctagatgctaaaggtatt
attctagaggagatgaaagttaaaagtgaaaaccttaaagaggagcctcagtcttctgaa
gaagaatctatgtcttctgtggaaaccaggacactaataaaatctgagcctgtaagtcca
aagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaagtgaaaca
gacagacgcatggttgcagccagaacagaacccctaactccaaacccagcttctaagaaa
ccaagagtccacaaaagaggatcagaatctagttctgattctgactcagattctgagaga
tcatcctgttcttccagatcatcttcttcctcatcatcctcctcttcttgctcccactct
cgatcaggctctagttcttcttcatcttcatcttgttcttcagcatcttcttcatcctct
tcctccacctcttcctcctcctcctcctcttcatcttcatcagaagaaagtgacagtgat
gaagaggaagcccaaaaacgagaaagcactactcacatgaaagcctatgatgaagaaagc
gtcgcgtcactgagcactacccaggatgagactcaggatagttttcagatgaacaatggc
acaccagagcctgcttacatcttacaaggtggatatatgctggcagcctcgtattggcca
aaggatcgtgtgatgatcaataggttggacagtatttgtcaaacagttctgaaaggaaag
tggccttcagctagaagaagttatgatgctaacacagtggcttctttctataccacaaaa
ctgctggacagccctggagcagctacggaatacagcgagcccagtgtacccactccccca
ggtgctggtgttaaagaagaacatgatcagtcaacacagatgtcaaaggaaggtggtttg
aagttgacatttcagaagcaagggcttgctcagaaaagaccatttgatggtgaagatggt
gctctggggcagcagcagtacctcactcggcttcgagagcttcaaagtgcatcagagacc
agcctcgtcaatttcccaaaatccataccagtatcaggtacttctattcaaccaaccctt
ggtgccaatggtgtgatattagacaaccagcctatagtcaaaaaaaggcgaggaaggagg
aagaatgtagaaggtgttgacatcttcttttttaacagaaataaaccacctaatcatgtt
tctttaggcttaacctcctctcagatttccacagggataaatccagcactatcctatact
cagcctcaaggaattcctgatacagaaagtccagttccagttattaatctgaaagatgga
acaagacttgcaggagatgatgcaccaaagagaaaggatttggaaaaatggcttaaggag
cacccaggttatgtggaagatttgggagcttttattcctagaatgcagcttcatgaggga
agacccaaacaaaaaagacaccgttgcagaaaccccaataaactagatgtgaatagtctc
actggagaagaacgtgttcaactgattaacagaagaaatgctagaaaggttggaggtgca
tttgctccccctttgaaagatttatgtagattcctaaaagaaaattcagaatatggagta
gctcctgaatggggagatgttgttaagcaatctggatttcttccagaaagcatgtatgaa
cgtattctcactggtcccattgtgagagaggaagtaagcaggcgggggagacggcctaaa
agtggaattgcaaaggccacagcagcagcagctgctgcatctgccaccagtgtttcaggc
aatcctttgttagccaatggattacttccaggtgtggatctcacaactcttcaggcctta
caacaaaacctacaaaacttgcagtcactgcaagtaactgcagggttgatgggaatgcct
actggccttccttctggaggagaagctaaaaacatggctgctatgttccccatgctgctg
tcaggaatggctggattaccaaatctgttgggcatgggaggactcctgacaaagcctacg
gaatctgggacagaagacaaaaagggaagtgactctaaggagtcagaaggaaaaaaagaa
aggacagagagccaaagttcagagaatggtggagaaaactctttgtcaagttctccttcc
acatcctctactgctgcattaaatacagctgcagctgccaacccattagctcttaaccca
ctattactatctaatatactttatccagggatgcttctcactccaggccttaatcttcat
attccaactttgtcccagtccagtacttttgatgtacaaaacaaaaacagtgacttaggc
tcatctaagtctgtagaagtaaaggaagaagattccagaattaaagatcaggaagacaaa
ggaactgaaccaagtcctctcaatgaaaacagcacagatgagggttcagagaaagctgat
gcttcatctggatctgatagtacatcgtcgtcatctgaggattcagattctagtaatgaa
gactga
DBGET
integrated database retrieval system
